Desulfitobacterium hafniense DCB-2: Dhaf_1514
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Entry
Dhaf_1514 CDS
T00822
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dhd
Desulfitobacterium hafniense DCB-2
Pathway
dhd03420
Nucleotide excision repair
dhd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dhaf_1514
03430 Mismatch repair
Dhaf_1514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dhd03400
]
Dhaf_1514
Enzymes [BR:
dhd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dhaf_1514
DNA repair and recombination proteins [BR:
dhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dhaf_1514
MMR (mismatch excision repair)
Other MMR factors
Dhaf_1514
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
ResIII
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
ACL19566
UniProt:
B8FP41
LinkDB
All DBs
Position
1610418..1612685
Genome browser
AA seq
755 aa
AA seq
DB search
MYRLEDLNPVQRQAVEHREGPLLILAGAGSGKTRVLTYRIAHLIAQGVEPWHILAITFTN
KAAQEMRDRVYSLVGSEGRGLWVATFHSACVRILRSEIGYLPGYSRSFVIYDSGDQLALI
KSCMKELNLDEKKFAPRAIEAVISDAKNKLLTPEDFSRRAKDYFEQKAERVYELYLKKLL
ANNALDFDDIIMLTVRLFRENPEVLSQYQDKFRYILVDEYQDTNHAQYALVNLLAKKYRN
LCVVGDDDQSIYMFRGADVQNILDFERDYPEAKTLKLEQNYRSTKSILQAANSVVQNNTE
RKEKSLWTENEDGQPIVYYVADNEHDEARYMGERIQRLLNVEGRKFNEFAVLYRTNAQSR
VIEERFMKEGIPYRIFSGLKFYERMEIKDILAYLRILHNPADQVSFSRVLNVPKRGLGES
TLEKILDYANEQEMPVLDAIMEADYIPELQSRAKKPLLAFAHLMQELRALAAAESSVTKL
VEEVLKRTGYWDNLVSDKSPEAEARLENLREFLSVTAEYDEKADNYETAVVQEGIEDALV
PGLTGFLEQVSLVAQIDSLDQADDAVVMMTIHSAKGLEFPVVFLGGMEEGIFPSSRSMLD
PVLLAEERRLCYVAITRARERLYLAYAQQRMLYGRTQYNRPSEFFQEIPTHVLVDRDPID
PPPTRAQKAHSAAARPAATPSGGPSPWRTGERTIGNPVQDAPGVDYKVGEKVEHAKFGKG
VIVAIKGEGSSAELSVVFGGEIKKLMAEYARLVKL
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtttagaggatttgaacccggttcagcgccaagcggtagagcatcgggaaggt
cccctattaatattagcaggggcaggctccgggaaaacacgggttttaacttaccgtatc
gcccatttaatcgcccaaggcgttgagccctggcacattctggccattacctttaccaat
aaagcagcccaggaaatgcgtgaccgggtctacagcctggtaggcagtgaagggagaggg
ctttgggtagcaacctttcactctgcttgtgtgcggattttaagaagcgagatcggctat
ttgcccggatattcgcggagttttgtcatttatgacagtggggatcagctggcattgatc
aaatcctgcatgaaagaactgaacctggatgagaagaaatttgcaccccgggctatcgaa
gcggtgatcagtgatgccaagaataagctgctgacaccggaggatttttcccgccgggcc
aaggattattttgagcaaaaggcagaacgggtctacgaactgtatctaaagaagctcctg
gccaataatgctctggatttcgatgacatcatcatgctgacggtccggctgttccgggag
aaccctgaagtattgtcccagtatcaggataaattccgctacattcttgtggatgagtat
caggataccaaccatgcccaatacgctttggtcaatcttctggctaagaaataccgcaac
ctctgtgtggtgggggatgacgaccaatccatctatatgtttcgcggggccgatgtgcag
aatatcctggattttgaacgggattatcccgaagccaaaaccttgaagctggagcagaat
taccgttcaaccaaatctattctccaggccgccaattcagtggttcagaacaatacggag
agaaaagaaaaatccctatggacggaaaatgaggacgggcagcctattgtctattacgtg
gcagacaatgagcatgatgaagcccgttatatgggtgagcgcattcaacgcctgctcaat
gtggaaggtcgcaaatttaatgagtttgccgtactttaccgcaccaatgctcaatcccgg
gttattgaagaacgctttatgaaggaaggaatcccatatcggattttttcgggacttaag
ttctacgaacggatggaaatcaaggatatcctggcttatctgcgcattcttcataacccg
gcggatcaagtgagcttttcccgggttttgaatgttcccaagcggggcttgggagagagc
actttagaaaagattctcgattatgccaatgaacaggagatgcctgttctggatgcgatc
atggaggccgactatatacctgagctgcagtcacgggccaagaaacctttgctggctttt
gcccacctgatgcaagagctcagggccttagccgccgcggagagctcagtaaccaaattg
gttgaagaagtattaaaacggaccggatattgggataatctggttagtgataaatcgccg
gaagcggaagcccggctggaaaacctgcgggagtttttatccgtgaccgctgaatatgac
gagaaagcggataactacgaaaccgcggtggtccaggaggggattgaggatgccctggtt
cccggactgacagggtttttggagcaagtgtccttagtagctcagatcgactctttggat
caggcagatgatgctgtggtgatgatgaccatccacagtgccaaagggctggaattcccg
gtggttttcctgggcgggatggaggaaggaatcttccccagcagccgctccatgcttgat
ccggtgcttttggcggaagagcggagactttgctacgtggccataacccgtgcccgggag
cgtctctatctggcctatgcccagcagcggatgctttacggaagaactcaatacaaccgc
ccttccgagttctttcaggaaattcccacccatgtcctggtggaccgggatcctattgat
cccccgcccacccgggcccagaaggcccattcagctgcggcaaggccggcagcgacgccc
tcgggaggcccatcaccctggagaaccggggagagaactattggcaatcccgtccaggat
gcccccggggtggactataaagtgggagaaaaagtggaacatgccaaatttggcaaaggt
gtgattgtagctatcaaaggcgaggggagttcggctgaactttccgtggtctttgggggc
gagatcaagaagcttatggcggaatatgccaggcttgttaagctttga
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