KEGG   Desulfitobacterium hafniense DCB-2: Dhaf_1574
Entry
Dhaf_1574         CDS       T00822                                 
Name
(GenBank) DEAD/H associated domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
dhd  Desulfitobacterium hafniense DCB-2
Brite
KEGG Orthology (KO) [BR:dhd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dhd03400]
    Dhaf_1574
Enzymes [BR:dhd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Dhaf_1574
    5.6.2.6  RNA 3'-5' helicase
     Dhaf_1574
DNA repair and recombination proteins [BR:dhd03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Dhaf_1574
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C WHD_4th_Lhr WHD_3rd_Lhr ResIII WHD_2nd_Lhr PhoH AAA_22
Other DBs
NCBI-ProteinID: ACL19624
UniProt: B8FP99
LinkDB
Position
1680007..1684146
AA seq 1379 aa
MSEPSLEIFNKLTERWFTNALGAPTAVQEQAWPVIAAGRHTLVSAPTGTGKTLTAFLVFI
DRLLEQAARGALKQEMQLIYISPLKSLAGDIRENLRRPLEGILAERSKAGAPAGPELHIG
MRTGDTPQKERNRMIKTPPHILITTPESLYLMLTSQSGQKILRTAQAIVIDELHALIDSK
RGAHLMLSVARLDRLCGRPLQRIGLSATIEPLDIAARYLSPDPVTVIAPRMEKQIRIEVT
SPLSDQRVALKDTVWKELAKTVYAYCGGAGSAIAFVEGRAYAEKLAYFINQLGGEGFART
HHGSLAKEQRFEVEQALRSGSLRLLCATSSMELGIDVGEIDQVFQIGCPRSISSTMQRLG
RAGHNPNRTSVMHMFPREGVEGLYCGLTAEVARQGGIEYSRPPRLCLDILAQHLVSMACG
DGYTVEDVLALLPRAYPFREVREEDVRAILGMLAGDYEHERDIPVRPRIIYDRLHGQVRG
DAYSRMLAVSAGGTIPDRGLYACRTESGVKLGELDEEFVFESRLGDRFLLGTFAWQIAGI
SKDTVTVTPATTAGARLPFWHGDLKGRRLRTGLAFGEIFRRLTQAAQSGTLLKELKKLGL
DEAAAQSALGFLQRQLQSTGSLPDDKTMIIEHFKDESGNHQLMVHSVFGRPVNEPLSLLV
REVAARHMETTINAVADDDGFLLFPYDGSPLPQGLLQEVVPATARRIAAALLPATPLYNM
NFRYNTARALLMGVKGNQRQPLWIQRMRSAELLASLVEQEQHPLIRETRRECLEDYWDLD
GVEYLLEGIRAGDIQVRELYLDVPSPMSLTLRRQTEAAMMYDYAPTPQPIHQAIESALKK
GEGIEPAPEQLARVSERTRLPQDADQLHALLMMEGDLTAGELEVPIEWLEALAAEGRVQY
IEPGLWIAAEQAQDYEEALSGRDLQAGQRLVRRLLRYRGAQSAEQVGERYLWPVGRALEL
LALLCAEGKAVEQEGLYYHGELYDRARKATLKSRRQVTTLPAERYAALVTSRMQISAPAA
EQLETALKTLRDQPFPAEAWETILLPARVGNYRPELMDACLAGGTLFWRLSPDGGLSYHL
TADIDWEADLSGTLETLTGKEKVIYQALLNYGASFMQRLNGLVEGSPYDTLIQLAARGLV
SADSFIPVRQWLDRDKLQKNTARQARQRVNARMRILATGRWEVIRPPKALSVEEQLERNF
DRAVILCRETIQGMGWSTALATLRIWEYTGRVRRGYFIEGLSGIQFIREKDYAGTMLTLT
QPRDQILWLNAGDPAQPWGRSLPHQPDRKFHNLPGTVVALRTGVPVAVLERQGRNLRIFA
PEHLASALEAFVQDYAGRRVFPAQTRIVVKDYPPEAAAALSAAGFSRELLDYVFYRPYR
NT seq 4140 nt   +upstreamnt  +downstreamnt
atgtccgaaccttcactggaaatctttaataagctgacggagcgctggtttaccaacgcc
ctcggtgcgcccacggcagttcaggagcaagcctggccggtgattgccgccggccggcat
acgctggtatccgcccctaccggtaccggtaagaccctgacggcatttctggtctttatc
gacagattgctggaacaggctgcaaggggggctttaaagcaagagatgcaactcatctat
atctctcctctgaaatccctggccggtgatatccgggagaatctgcgccgccccctggag
ggaattctggcggaaaggtcaaaagcaggtgccccggccggtccggagctgcacatcggc
atgcgcaccggcgataccccgcaaaaagagcggaaccggatgattaaaacgccgccccat
attctgatcaccacccccgaatccctttacctgatgctgaccagccaatccgggcagaaa
atcctgcgcaccgcccaggcgatcgtcatcgatgaactgcatgccctgatcgattccaag
cggggggcgcacctgatgctgtccgtggctagactggacaggttgtgcggccggccgctg
cagcggattggcttatcggccaccatcgagcctttagatatcgccgcccgttatctttct
cccgatccggtgacggtgattgcccctcggatggaaaagcagatccgcattgaagtgacc
agccccttatccgatcagcgggtggccttaaaggatacggtctggaaagagctggccaaa
acggtctatgcctattgcggcggtgccggcagtgccattgcctttgtggaaggtcgggct
tacgcggaaaagctggcctattttatcaatcagctcgggggagagggctttgcccgcacc
catcatggcagcttagctaaggaacagcgttttgaagtggagcaggctctgcgcagtggg
agtctgaggctcttgtgtgccacttcctccatggagctgggcatcgacgtgggggagatc
gatcaggtcttccagatcggctgtccccgttccatctccagcaccatgcagcgcctgggc
cgggccggacacaatcccaaccggaccagcgtcatgcacatgtttcccagggaaggggtg
gaaggcctctattgcggactgactgcggaagtggcccgccaggggggaatcgagtactcc
cggccgccccggctttgcctggacattctggcccagcatctggtatccatggcctgcggc
gacggttatacggtggaggatgtgttggccctgctgccccgggcttatcccttccgggag
gtaagggaggaggatgtacgggcaatcctgggcatgctggcgggggattacgaacatgag
cgggatatccctgtccgccccagaatcatctatgaccggctccatggccaggtccggggg
gatgcctacagccggatgctggccgtcagcgcgggaggaaccatcccggaccgggggtta
tacgcctgccggacggaaagcggagttaagctgggggagctggacgaggaatttgtcttt
gaatcgaggctcggggaccggtttttgctgggcacttttgcctggcagattgccggcatc
tccaaggacactgtgactgtaaccccggccactacagccggggccagactgcccttttgg
cacggggatctgaaaggacggaggctgcgcaccggcctggcctttggtgagattttccgc
cggctgacccaggcggctcaatcagggaccttgctcaaagagctgaaaaagctggggctg
gatgaggctgccgcccaaagcgctctgggctttctccaacgccaactccagagtaccggc
agcctgcccgatgacaaaaccatgatcatcgagcattttaaggatgaaagcggcaaccat
cagctgatggtccattccgtctttggccgcccggtgaatgagcctctgtccctattggtc
agggaagtggccgcccgccatatggagaccaccatcaatgcagtggccgatgatgacggc
tttctgctctttccttatgacggcagtcccctgccccagggcctgctccaagaggtggtg
ccggctaccgcccggcggattgcagccgctttgctgccggccacccccctctataatatg
aatttccgctataacacggcccgggctcttttgatgggagtaaaaggcaatcagcgccag
cccttgtggattcagcgcatgcgcagtgcggaactcctcgcttctctggtggagcaggaa
cagcatccgctgatccgggaaaccaggcgggaatgcctggaggactactgggacttggac
ggagtcgaatatctcctggagggcatccgggcaggagatatccaggttcgggagctgtat
cttgatgtcccttcacctatgtccctgaccctgaggcggcagacggaagccgccatgatg
tacgattatgcgcccacgccccagcctattcatcaggccatagagtcagctttaaagaaa
ggggaggggattgagccggctccggagcagctggcccgcgtatccgagcggaccagactt
ccccaggatgcggaccagctccatgccttgctgatgatggaaggggatctgacggcggga
gaactggaggtccccattgaatggctggaagctttggcggccgaggggcgggttcagtac
atcgagcccggcctgtggattgccgccgagcaggcccaggactatgaggaggctttatcc
ggccgggatttacaggccggccaacggctggtccgcaggctgctgcgctaccggggagcc
caatcagccgagcaggtgggggaacgttacctgtggcctgtggggagggcccttgagctt
ctggccttgctttgtgccgaaggaaaagcggtggagcaggaagggctgtattaccatggg
gagctttatgaccgggccagaaaggccacgcttaaaagccgccgtcaggtaaccactttg
ccggccgagcgctatgccgccctggtgaccagccggatgcagatttcagcccccgccgcc
gaacagctggagaccgcgctgaaaaccctcagggatcagccctttccggcggaagcctgg
gaaactattctgctgcctgcccgggtgggaaattaccgtccggagctgatggatgcctgt
ctggccggcggcaccttgttctggcggctcagtcccgatgggggactcagctatcacctg
actgctgacattgactgggaggcggatctgtccgggaccctggaaaccttaacaggcaag
gaaaaggtgatctatcaggctttgttgaattatggagccagctttatgcaacggctgaac
ggactggtggaaggctccccctatgataccctgatccaactggcagcccgagggctggtg
agcgcggacagctttattcccgttcgccagtggctggaccgggataagctgcaaaagaat
acggcaagacaggctcggcagcgggtgaacgcccggatgagaattctggccaccgggcgc
tgggaagtgatccgcccgcctaaggccctgagcgtggaagagcagcttgagcgcaatttt
gaccgggcagtgatcctttgccgggaaaccatccagggaatgggctggagcacggccctg
gcaaccctgcgcatctgggaatataccggccgggtgcgccggggctactttattgagggg
ctgtcgggaatccagtttatccgggagaaggattatgccggtaccatgcttaccctaacc
cagcctcgggatcagatcctctggctgaacgccggcgatccggcccagccctggggcaga
agcctgcctcaccagccggacaggaaatttcacaatctgcccggaacggtagtggccttg
cgcaccggtgtgcctgtggccgtgctggaacggcagggcaggaatctgcggatttttgcg
cccgagcatctggcttcagccctggaggctttcgtccaggattatgccggacgccgggtc
ttcccggcccagacccggattgtcgtcaaggactatccgccggaagctgccgcagccctc
agtgctgccggcttcagccgtgagttgctggactatgtgttctaccggccttatcggtga

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