Desulfitobacterium hafniense DCB-2: Dhaf_1641
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Entry
Dhaf_1641 CDS
T00822
Name
(GenBank) Xylose isomerase domain protein TIM barrel
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
dhd
Desulfitobacterium hafniense DCB-2
Pathway
dhd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Dhaf_1641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dhd03400
]
Dhaf_1641
Enzymes [BR:
dhd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Dhaf_1641
DNA repair and recombination proteins [BR:
dhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Dhaf_1641
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ACL19687
UniProt:
B8FPG2
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All DBs
Position
1753859..1754680
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AA seq
273 aa
AA seq
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MEKLLFGISGLPLGDGTKRFNYATGIHYLKSIGLDAMELLFVHSVNVTDNNKGAILEAKQ
KEGFYLSAHASHYINLNSNDIAKQNQSITRIIDAAKGLAKVGGRSLVFHPGFYMSDAKEA
AYATIKSNLMRLSSCGIDYRLETTGKGSQFGTLEELVALCQEVPLCKLCLDFAHIHARSN
GGLKNYDDFAGVLKYVLDHLGRTALEDLHIHMGGIRYTVKGERSHAPLLESDFNYQECLR
AIKDYDVRGCIIAEGPLLERDALLLKETYEKLQ
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattattatttggtatttccggtttgcccctgggtgatgggacgaaacggttt
aattatgcaaccggcatacattatttaaagtctatagggctggatgccatggaactgctg
tttgtccacagtgtcaatgtgacggataacaacaagggggctatcctggaggcaaagcaa
aaggaaggcttttatctctcagcccacgcatctcattatatcaacctaaattccaatgat
attgctaaacaaaatcaatcaatcaccagaataattgatgcggcaaaagggttagcaaag
gttggaggaaggagcttggtattccatccgggattctacatgagtgacgccaaggaagct
gcttacgctacaattaaaagcaatttgatgaggctttcgagttgtggcatagattacagg
cttgagacaaccggaaaagggtctcagttcggaacactggaagagctggttgctctttgt
caagaggtgcccttatgtaagctttgccttgattttgctcatattcacgcgagatcaaac
ggcggccttaagaattatgatgattttgccggtgttcttaagtacgtccttgatcattta
ggcagaacggccctggaggatttacacatccatatgggtggaataagatacacagtgaaa
ggggaaagaagtcatgctccattactggaaagtgactttaattatcaggaatgtctaagg
gctataaaagattatgatgtccggggatgcatcatagctgaagggcctcttttagaaaga
gatgctttgcttttaaaagaaacctatgaaaagctgcaatag
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