Desulfitobacterium hafniense DCB-2: Dhaf_1867
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Entry
Dhaf_1867 CDS
T00822
Name
(GenBank) PAS modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
dhd
Desulfitobacterium hafniense DCB-2
Brite
KEGG Orthology (KO) [BR:
dhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dhd03000
]
Dhaf_1867
Transcription factors [BR:
dhd03000
]
Prokaryotic type
Helix-turn-helix
Other families
Dhaf_1867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
Mg_chelatase
AAA_5
Diguanyl_cycl_sensor
PAS
AAA_2
PAS_9
AAA
IstB_IS21
MCM
TIP49
DUF815
HTH_29
AAA_7
HTH_23
PAS_8
AAA_16
HTH_7
HTH_50
AAA_3
HTH_17
Motif
Other DBs
NCBI-ProteinID:
ACL19908
UniProt:
B8FQL8
LinkDB
All DBs
Position
complement(1994020..1996113)
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AA seq
697 aa
AA seq
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MHYQSNVENVNPYIGPTADIDISGRWRGIMQSKKDFLEKGTDPRLSPYVRDEIANSWIRS
QSYNLTPESMGTAPTISSRELNSIFEQNKELIDIAFPLLDSFKPLLTESGYMVSLVDGSG
IVLYRNGNTKMVDRYGNTIGPGVLWNEATIGTCAHVLSIRHKKPISLLGPENFPAYFQND
ITSTAPLFDSDGKVIAVLILLQKLGDDPWDLDLHNLQYLTLGWVTSLAMEIKTQLNLKLS
NSLFKSTNTALQTAIKMMTEGMVIVSREGLIQHINSPAAQIFNCNTNEAIGRNIMEFLVK
NDALAEALRQLKMIHNIEVEVLNDYGTQGYTFSIQPLPADSSGSSGGVVKIVDTEKAKNM
VSSSSGAKLDFDFQSIKGASTKMLRTKSLAQRFARSPANILLIGESGTGKELFAQAIHNE
YRPSGPFIVLNCAAIPKNLIESELFGYDSGAFTGAKKNGSPGKIELAEGGTLFLDEIGDM
PIEIQAVLLRVLENKQVMRIGGSKYRAVDFRMVAATNKDLATLVQSGQFRQDLYYRLSVL
RVDIPPLRQRDSDVLSLAEFFIQKYNWRSKLPKLSHETKIKLMEYTWPGNVRQLENAIIY
ALNVSEDELILPEHLPDEIIHNKNHPASLSLNPIELSKENNLNEAELRDVVSLKEAEKIV
VQNALAKSGNNICIAAELLGLSKSTLYRKLKLLGIDE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcattatcaatctaacgtagaaaatgtcaatccatatattggccctactgcagatata
gacatctctggtcgatggcggggtattatgcaaagcaaaaaggacttcttggaaaaaggt
acggatcctcgtctctccccttacgtcagagatgaaatcgccaattcctggattcgctcc
caaagctataacctaacccctgaatcaatgggtacggcgccaacgattagttcccgtgag
ctaaactccatatttgagcagaataaagagttgatcgacatcgccttccctctgttagac
agttttaaaccattgctcacggaatccggttacatggtatctttggtcgatggcagcggg
atagtactctaccgcaacggtaatacaaaaatggtcgatcgctatggaaatactattggc
ccgggtgtcctatggaatgaggcgacgattggaacctgcgctcatgtcttgagcattcgt
cacaaaaaacctatctctttgttaggtccggaaaactttcccgcttatttccagaacgat
atcacctccactgctcctttatttgatagtgacggaaaagttattgccgttttgatctta
ctgcaaaaacttggtgatgacccttgggatcttgatctccacaacctgcagtatctgact
ctagggtgggtcacatctctggctatggaaatcaaaactcagctcaatctgaaactcagc
aattcattgttcaagagtacgaataccgctttacagactgccatcaaaatgatgaccgaa
gggatggttattgttagccgggaagggcttatacagcatataaattctcctgcggcgcaa
atatttaactgtaatacgaatgaggcaatcggccgcaatatcatggaatttcttgtgaag
aacgacgcattggcagaagctctgcggcaacttaaaatgatccataatattgaagtcgaa
gtccttaatgactacggaacccaaggctataccttttcgatacagccactccccgccgat
tcttccggctccagtggtggtgttgtcaaaatcgtcgataccgaaaaagccaaaaacatg
gtatcctcaagcagcggagccaagctggatttcgattttcaaagcattaaaggcgccagc
accaagatgctgcggaccaaaagcctggcccaacgcttcgccagatcaccggccaatatc
ctattaattggcgaaagcggcactggaaaagaactcttcgcccaagccattcataatgaa
tatcggccttcagggccctttattgtccttaattgtgccgctattcccaagaacctcatt
gaaagtgaattattcgggtatgacagcggtgcctttaccggcgccaaaaaaaatggcagc
ccgggaaaaatagagctggccgaaggcggaacccttttcctggacgaaataggtgatatg
cctatagaaattcaggcggtattactgagagtcttggaaaataagcaggttatgcgcatc
ggcggcagtaaataccgggccgtcgacttccgcatggtggccgcgactaacaaagacctg
gcaaccttagtccaaagcggtcagttcagacaagatttatattatcgtctgtccgtactc
agagtggatattccgccccttcgccagcgggatagtgacgtgctttctttagccgagttt
tttatccagaagtacaattggcgcagcaaacttcccaagctcagccatgaaaccaaaata
aagctcatggagtacacttggccgggcaatgttcgccagttagagaatgccattatctat
gccttgaatgtgtcagaagatgaattgattcttccagagcatttgcctgacgaaattatc
cacaataaaaatcatcctgcctccttatccttgaaccccattgaactctccaaagaaaac
aacctgaacgaggccgaactcagagatgtggtctccctgaaggaagcggaaaaaatagtc
gtacagaatgctctggctaagtcggggaataatatctgtattgccgccgaattattggga
ttaagcaagtccactctttatcgcaaattaaagctcctcggcatcgatgaataa
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