Desulfitobacterium hafniense DCB-2: Dhaf_1900
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Entry
Dhaf_1900 CDS
T00822
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
dhd
Desulfitobacterium hafniense DCB-2
Brite
KEGG Orthology (KO) [BR:
dhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dhd03000
]
Dhaf_1900
Transcription factors [BR:
dhd03000
]
Prokaryotic type
Helix-turn-helix
Other families
Dhaf_1900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_2
MCM
HTH_7
AAA
HTH_psq
HTH_23
HTH_1
HTH_28
Mga
AAA_16
PAS
HTH_30
HTH_22
HTH_17
PAS_8
DUF815
IstB_IS21
IclR
HTH_Tnp_ISL3
HTH_5
NUMOD1
HTH_29
AAA_3
RWP-RK
HTH_20
HTH_11
nSTAND3
AAA_7
HTH_24
HTH_50
Motif
Other DBs
NCBI-ProteinID:
ACL19941
UniProt:
B8FQQ1
LinkDB
All DBs
Position
2036128..2038281
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AA seq
717 aa
AA seq
DB search
MIPVKKKLKRTPNQTWNKPVMTKERWEGILAFKAQFVADSGADPLACPHLDKMVAESWIR
SRLAGVDPYKNAVNHYLHREQYEKIVKKSAFLIEVTKPLFDVFKNLIHSSNYEMHLIDTA
GNSLLNENSYRYLMNPLEKRDLHFTLSSSESTTGTCAHALALRHKKPVQLFGPEHYLWEL
QDIVASSAPVFNENNEVIAALSLIQHLNDSPWAEGYQVLCTHTLALITAITKAIEAQLKL
HKSYEKLADNNQQLLLANSELSAANQQILTTHDLLRTTLSLTGEAIITIDCQGNILEMNE
TARKILQIPPDSQENVNITGYLSKNCLLLDWVAEGKDLTDKEEIFYFGNTPQSYIVSMKV
VLGDNKNGGLAVLRFQNARTYNLNATKRAGTNASFHFDDLIGESPSFKGTLSLAKKFSKT
SANILLLGESGTGKELLAQSIHNDYRPEGPFIALNCAAIPRSLIESELFGYESGSFTGAD
RTGRPGKIELADKGTLFLDEIGDMPLDIQAVLLRVLEDRKVLRIGGRKAKNVDFRVIAAT
NKDLRRMVQEKTFREDIYFRLSVLTIHIPPLRTRSGDIEKLCQYFLSNYCRSNGYGKKAL
SEEALYLLTSYSWPGNIRQLENAIIYGINLSDNSLIEARHLPTDILGADKVEKPKRPPAM
EIPATHEAYGRSSTLQEMELNAIIMALEKTNNSVTKAAKILNISKSTLYRRLRELNM
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgattcccgttaaaaaaaaattaaaacgaaccccaaatcagacttggaataaaccggta
atgactaaagaacgctgggaaggcattcttgcttttaaggcgcaatttgtcgccgatagc
ggcgccgatccgcttgcctgtccgcatctggacaagatggtggcggaatcatggataaga
tcccgcctagctggggttgatccttataaaaatgccgttaatcattatctgcatcgtgaa
cagtacgaaaaaatagtgaagaagagcgcatttctcattgaggtgaccaaaccacttttc
gacgtgttcaaaaatcttattcactcctccaattatgaaatgcatttaatcgataccgca
ggcaacagtctcctaaatgaaaacagctataggtatctcatgaatcctcttgagaagaga
gacttgcatttcaccttatccagcagtgaaagcactaccggaacatgcgcccatgcgctt
gccttacggcacaaaaaaccggtgcagctgttcggcccggaacactacctttgggaactg
caggacattgtagcttcatcggctccggtttttaacgagaacaacgaagtcatcgccgcc
ttgtctctgatccagcatttaaatgactccccctgggcggaagggtatcaagttctctgt
acccataccctcgctctgattacagccataaccaaggctattgaagcccagctcaagctc
cataagagttatgaaaaattagcggataataatcagcaattacttctggccaatagcgag
ctctctgctgcgaatcagcaaattctcaccacccatgatctgctgcggactactttgtct
ttgaccggcgaggcaatcatcacaattgactgccagggcaatattttagaaatgaacgaa
accgcccggaaaatactgcagataccacccgattctcaagaaaatgtgaatattaccggc
tatttgtccaagaattgtttactgttagactgggttgctgaaggcaaagatcttaccgat
aaggaagaaatattctatttcggcaatacgccccaatcctatattgtcagcatgaaagtg
gttctgggtgacaataaaaatgggggactggcggtactgaggtttcagaatgccagaacg
tataatctgaacgctacgaaaagagccggaaccaatgccagtttccattttgatgacctg
atcggggagagcccctcgtttaaagggactttatccttagctaaaaaattctccaaaacc
tctgcaaatattttgttgttgggagaaagcggcaccggcaaagagctgcttgcgcaatcc
attcacaacgactaccggccggagggaccttttatcgccttgaattgcgccgctatccct
aggtcgttaatcgaaagcgaattattcggctatgagagcggttcgtttaccggtgccgat
cgcaccggccgccccggtaaaattgagttggccgacaagggtactttgtttctggacgaa
ataggcgacatgcccctggatattcaggcggtactgctgcgtgttttggaagacaggaag
gtcttacggattggtggacgaaaagcaaaaaatgtggatttccgcgtcattgctgcaacc
aataaagatctccggcgcatggtgcaggagaaaacgtttcgcgaagatatttattttcgc
ttatcggttctgaccatccacattccgccgcttaggacaagaagcggcgatatcgaaaaa
ttatgccagtatttcttgtcgaattactgtagaagcaacggatacggaaaaaaagctctg
tccgaagaggccctgtatctgttgacctcatacagctggccgggcaatatccgccaactg
gagaatgcgattatttatggtatcaatctatcggataactctctcattgaagccaggcat
ttgccgacagatatcttgggagccgataaagtcgaaaagcccaaacggcctccggctatg
gaaatacctgcaacccatgaagcttatggtcgttcatccacattacaggaaatggaatta
aatgccattattatggctttagaaaaaacgaataatagtgtaacgaaggcggcaaaaatc
ctgaacatcagcaagtcaaccttatatcgccgtttaagagaacttaatatgtga
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