Desulfitobacterium hafniense DCB-2: Dhaf_2265
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Entry
Dhaf_2265 CDS
T00822
Name
(GenBank) ABC transporter related
KO
K03701
excinuclease ABC subunit A
Organism
dhd
Desulfitobacterium hafniense DCB-2
Pathway
dhd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dhaf_2265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dhd03400
]
Dhaf_2265
DNA repair and recombination proteins [BR:
dhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dhaf_2265
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dhaf_2265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_21
AAA_15
AAA_29
Zn-ribbon_8
AAA_22
AAA_16
APS_kinase
ATPase
AAA_33
nSTAND3
NTPase_1
DnaJ_CXXCXGXG
AAA_18
AAA_25
AAA_23
HypA
DUF2321
Viral_helicase1
ComA
Motif
Other DBs
NCBI-ProteinID:
ACL20296
UniProt:
B8FST5
LinkDB
All DBs
Position
2445260..2447722
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AA seq
820 aa
AA seq
DB search
MADIFLHGVREGNLKDISLTLPRNKLVIFTGLSGSGKTTLAIDVLYQECQRQYLEAIGYQ
GIHKPKLDELRNASPAVRITQNEYRKNPRSTVGTVTNIYTELRMIYEKLSQRTCPHCHRD
IRADQCQEELEKREDEFKVYMYCNHCGHKMDKLTRTYFSYNTREGACPTCQGLGKILQVN
KDNVVNEKLSLEAGAVDFWEQKYKDYQISVLYNAFQHYGVPIEPDTPVREFTNVQKAILF
YGVDSDQVKEFFPDIQAPKTVGGGRFEGIYPVLWRRIAEKSGDPRGLSAYFAEQICPDCA
GERLNGLSRSVTVLGTRLPELASLSLEELQDWLIKLEDSVTGTHQDLVASYLNDLKTKIR
RIIKVGLGYLSLDRQTMTLSGGEAQRIKLAATLDSTLTGIIYIMDEPTIGLHPQDTQGII
QILKELRDLGNTVIVIEHDMDVMSAADFIVDIGPGAGKLGGEIVGQGSIDELKEQGRSVT
GLYLNRPVREARSYRKGTGEFIEVQHGDLYNLKNINVRFPVGCLISVTGVSGSGKSTLVF
EVLAKGKYRSQGDPMKRNHVAGTELFEQIITVEQSPVTRMKRSNVATYSGVYTEIRKIFG
NLSEARRKGITPRHFSFNSRGGRCENCEGLGYVVSNMLFFEDLEVSCPVCHGDQFQDEVL
SVKYQGHSIKDVLGMSVEEALAVFALHPRITKVLELLEEVGLGYLELGQTLTTLSGGEGQ
RLKLAKELIGNEGKTNLYLIDEPTTGLHPLDVENFLALLNRMVDAGSTVIVVEHNQQVMQ
ASDWIIDLGPEGGHKGGRVMAVGTPEQIKSEPDSVTGRFL
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcagatatttttttgcatggggttagagaagggaatcttaaggatatttctttaacc
ctaccgagaaataaactggtgatttttacaggcttgtcgggttcaggaaaaacaaccctg
gccatcgatgtcctctaccaagagtgtcagagacagtatctggaggccatcgggtaccaa
gggatacataaaccgaagctggatgagttgcgcaatgcttctccagccgtacgcatcact
caaaatgaataccgcaaaaatcctcgttccacagtgggtacggtaaccaatatctacacc
gaactgcggatgatttatgagaagctcagtcaacggacctgtcctcattgccacagagac
atcagggcggatcaatgccaggaggaactggagaagagggaagatgagtttaaagtctat
atgtactgcaatcattgcggccataaaatggacaaactgacccggacttatttttcatat
aacacccgggaaggagcttgccctacctgtcaaggcttagggaagatactccaggtcaat
aaagataatgtcgtcaatgaaaagctgtcgttggaagctggagctgtcgatttttgggag
caaaaatataaggactaccaaatctcagttctctacaatgcctttcagcattatggcgtt
cctattgaaccggacaccccggtgagggaatttactaatgtgcaaaaagccattctcttt
tacggcgtggacagcgaccaagtgaaggagtttttcccggatatccaggcgcccaaaacg
gtggggggaggaagattcgaaggaatctatcccgttttgtggcggcgtatcgcggaaaaa
agcggtgacccgagagggttatctgcttactttgccgaacaaatctgcccggattgcgcg
ggggaacgcttgaacgggttaagccgcagtgtgaccgtattgggaacccgtttaccggaa
ctggcttctttatctttggaggagctgcaggattggctgatcaagctggaggactcggta
accggcacccatcaggatctggtggcatcctatcttaatgatttgaaaacaaagatacgg
aggattatcaaggtggggctgggctatttatctctggaccgccaaaccatgaccttatcc
ggcggggaagcccaaagaattaaattggcggcaaccttagactccaccttgaccgggatt
atctatattatggatgaacccacgatcggtcttcatccccaggatacccaggggatcatc
cagattcttaaggagctaagggatttaggcaataccgtcatcgttattgagcatgatatg
gatgtgatgagtgccgcagatttcattgttgatataggtccgggtgccgggaaacttggc
ggcgagattgtcggccagggcagtattgatgaacttaaagagcaaggcaggtccgttacc
ggcctttatcttaaccggcctgtacgggaagcccgctcttaccgcaagggaacgggggag
tttatcgaagtccagcatggcgatctttataatcttaagaacatcaatgtaagattcccg
gtagggtgcttgataagtgtgaccggtgtttcaggctctggaaaatccaccttggtgttt
gaggtcttagccaaaggaaagtacagaagtcaaggggatcccatgaagcgcaatcatgtc
gcgggtactgaactatttgagcagattatcaccgtagagcaatctcccgttacccggatg
aaacgctctaatgtggccacctattccggtgtctacacagaaatccggaagatttttggc
aatctgagtgaggcgagaaggaaagggattacccccaggcacttctccttcaatagccgg
ggagggcgctgtgagaattgcgaagggctgggttatgtggtcagcaatatgttgtttttt
gaggatctggaggtttcctgcccggtctgtcatggcgaccagtttcaggatgaggtgctt
tcagtaaagtatcagggacacagtatcaaagatgtcctgggcatgtccgtggaagaggcc
ttggcagtcttcgccctgcatccacggattactaaagtcctggagttgcttgaagaagtg
ggcttaggctatcttgagctggggcagactctgactactttatccggcggtgaagggcaa
cgcctcaagctggctaaggaactgatcggcaacgagggaaagaccaatctctatctcatt
gatgaacccacgacaggactccatcccctggatgtagagaactttctggctctgctgaac
cggatggtggatgccgggagcacagtcattgtggtggaacataaccaacaagtcatgcag
gcctctgattggattatcgacctcggtcccgaagggggccacaaagggggcagggtcatg
gcggttggaacacctgaacagataaaaagtgagccggattcagttacgggaaggtttctt
tga
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