Desulfitobacterium hafniense DCB-2: Dhaf_2410
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Entry
Dhaf_2410 CDS
T00822
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dhd
Desulfitobacterium hafniense DCB-2
Pathway
dhd03030
DNA replication
dhd03430
Mismatch repair
dhd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dhaf_2410
03430 Mismatch repair
Dhaf_2410
03440 Homologous recombination
Dhaf_2410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dhd03032
]
Dhaf_2410
03400 DNA repair and recombination proteins [BR:
dhd03400
]
Dhaf_2410
Enzymes [BR:
dhd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dhaf_2410
DNA replication proteins [BR:
dhd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Dhaf_2410
DNA repair and recombination proteins [BR:
dhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Dhaf_2410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
RMI2
Motif
Other DBs
NCBI-ProteinID:
ACL20438
UniProt:
B8FTK4
LinkDB
All DBs
Position
2601250..2604822
Genome browser
AA seq
1190 aa
AA seq
DB search
MGFVHLHVHTEYSLLDGAARIEKLVKKAVELGMPSVAITDHGVMYGIIDFYKACKKAGIK
PIIGCEVYVAPHRRTEKVPGRDDNNRHLVLLAENEEGYKNLIKLVSMAHIEGFYYKPRVD
KDILRRHSRGLIALSACLAGEVSEYLLNNQLETAVESALEYEEIFGKGNFFLEVQDHGLE
EQQRVNTGMFEVQRRTGIPMVATNDVHYVNKEDAFIQDVLICIQTGKNLTDASRMSFSSE
EFFLKSEAEMNLLFGEHPEILENTARIAERCQVDFKFGDNYLPVFEVPEGYTLDTYLRKK
CYEAFPLFYPNQRTEEKERLDYELGVIAQTGFSGYFLIVADFCQYARQNGIAVGPGRGSA
AASMVAYLMGITTVEPMQHDLLFERFLNPERISMPDIDIDFDPDGRERVINYVMEKYGAD
KVCQIITFGTMGAKAAIRDVGRVLGIPLARVDKVAKAIPSDLGMTLEKALAVSPDLVKLL
EEDGEIKKLYEIARSLEGMPRHASTHAAGVVIAKDALDTYIPLQRTSDGGFTMTQFPMKT
VEEVGLLKMDFLGLRNLTIIQETLKQIEGNRGEVLDLQSLPLDDKATFDMLSLGNSTGVF
QLESGGMRNVLKELKPSCFEDIIAVVALFRPGPMEQIPEFIRRKHGGNVSYLHPLLEPIL
RSTYGVIVYQEQVMQIARDLAGYSLGRADLLRRAMGKKKKEIMEEERQSFIYGLQSPSGE
EIIPGALKLGLTEKEAAEIFDLMAKFAEYGFNKGHATAYAVISYQTAYLKANYPLEFNAA
LISTVMSSADKVSFYIHEARQSGIEILPPDVQYSQVGFSIEGRGIRFGLGAIRNVGVNVV
EKIIEARQEGLFDSLYDFCIRVDAKVLNKRVLESLLKAGAFSLLCKRAQGLLALDSILEI
AQQRQRDKESGQISLFDFGDDLDEGIELPDVEEYSPRELLTMEKEYLGLYLSGHPLESVL
PKLKNAVSEDILTCLEGDEEKKVILGGIVTGYRTTVTKRGEMMASFVLEDLTGTIDVLVF
PRIFAQSARLTEDQVVVVEGRYNIRDDERKIFAERITDLENGAERTKPIGYKDYEKTQTR
EKAQTRTQPPTQPSTQSPPKLSAVPSAKPGAVPARKLYLRFPYEGTPLLEEALPILRHYS
GTHPVLFYFEQDKKLIQGNRELWVNDLEELVQALSNILGESNVVWKVNAM
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgggatttgttcacctccatgtccatacggaatacagccttcttgatggggcggcccgg
attgagaaactggtgaaaaaagccgtcgagctgggtatgccctcggtggccattaccgat
cacggtgtcatgtatggtattattgatttttataaagcctgcaaaaaggccggcattaag
cccattattggctgtgaagtttatgtggccccgcaccggcggacggagaaggtgccggga
cgggatgacaacaaccgccatcttgtgctgctggctgaaaatgaagaagggtacaaaaac
ctcattaaacttgtctccatggctcatatcgagggcttttattataaaccccgggtggac
aaggatatcctgagaaggcacagccggggactgattgccttaagtgcctgcttagcggga
gaagtctcggagtatctcctcaataatcagctggagacagcggtagagagtgcgttggag
tatgaagagatcttcggcaaagggaatttctttttggaagtccaggaccatggcctggag
gagcagcagcgggttaatacgggaatgtttgaggtgcagcgccgaacagggattcccatg
gtagccaccaacgatgtccattacgtcaacaaagaggatgcctttatccaggatgtgctc
atctgcattcagactggaaagaaccttaccgatgccagccgtatgagcttttccagcgag
gagtttttcttgaaatcggaagcggagatgaatctgctgtttggcgagcatccggagatt
ctggagaacacggcccggatcgcggagcgctgtcaggtagactttaaattcggggacaat
tatttgccggtctttgaggttccggaaggctataccctggatacctatctgagaaaaaaa
tgctatgaagcttttccgcttttttaccccaaccaaaggaccgaagaaaaagagcggctg
gattatgaattaggagtcatcgcccaaaccgggttctccggctattttctgatcgtggcg
gacttttgtcagtatgcccgtcaaaatggtattgccgtggggccgggcaggggatctgcc
gccgccagtatggtagcttatctgatggggattaccactgtagaaccgatgcagcacgat
ctgctttttgagcggtttttaaatccggagcggatcagcatgccggatattgatatagac
tttgacccggacggccgggagcgggtgatcaactatgttatggaaaaatacggcgccgat
aaggtctgtcagatcattacctttggaaccatgggcgccaaagcggccattcgtgatgtg
ggcagagtgctgggaattcctctggcccgggtggataaagtggccaaagcgatccccagt
gacttaggtatgaccttggagaaagccctggctgtatcccccgatttggtgaagctcctg
gaagaggacggggagattaagaagctctatgaaatcgcccgctccctcgaaggaatgcct
cgtcatgcttccacccatgccgccggtgtggtgatcgccaaggatgctctggatacctat
atccccttgcaaaggacttccgacggaggcttcaccatgacccaattccccatgaagacg
gtggaagaagtgggcctccttaaaatggacttcctggggctgcgcaacctgaccatcatc
caggaaaccttaaagcaaattgaggggaatcggggggaagtgctggatctgcaaagcctg
cccctggatgacaaggccacttttgacatgctttccctgggcaacagcaccggtgttttc
caactggaaagcggggggatgcgcaatgtacttaaagaattgaaaccatcctgttttgaa
gatattatcgcggtggtcgccctgttccgtcccggccccatggagcagattccagagttt
atccgccgcaagcatgggggaaacgtctcttacctgcatcccctgctggagcccattctc
agaagcacctatggggtgatcgtctaccaggagcaggtcatgcagattgcccgggattta
gcaggttattccctgggacgcgccgatctgttgaggcgggctatggggaaaaagaaaaag
gagatcatggaagaagagcggcaaagctttatctatggtttgcagagccccagcggcgag
gagattattcccggtgccctaaaactcggcctcacggaaaaggaagctgcggaaatcttt
gacttgatggccaagtttgccgaatatggctttaataaagggcatgccacagcctatgcc
gtgatttcttatcagacagcttaccttaaagccaactatccgctggagtttaatgcggct
ttaatcagcaccgtgatgagctcggcggataaggtgtccttttatattcatgaagcccgg
caaagcgggattgaaattctccctccggatgttcagtacagtcaggtgggcttcagcatt
gaaggccggggcattcgctttggcttaggggctatccgcaatgtgggggtcaatgtggtg
gagaaaatcattgaggcccgtcaggaaggcctttttgactccctctatgatttctgcatt
cgtgtggatgccaaggtcctcaataagcgggtcctggaaagcctcctcaaagccggagct
ttcagcttgctgtgtaaaagggcccaaggactcttagccttggattctatcctggagata
gcccagcagcgccaaagggataaagagagcggacaaatttccctgttcgattttggggac
gacttggatgaagggattgaactccctgatgtcgaagaatattctcctcgagaactcctg
acgatggaaaaggaatatctgggtctttatctcagcggccatcctctggaaagtgttctt
cccaagctaaagaatgctgtctctgaggatattctgacctgtctcgaaggcgatgaggaa
aagaaggtcatcctggggggaatcgtcaccggataccgcaccaccgtgaccaaacggggg
gaaatgatggccagctttgtgctggaggatttaaccggaactatagatgttttggtgttc
ccgcggatttttgcccaaagtgcccgtttgacggaggatcaggtcgtggtggtggaagga
agatacaacatccgggatgatgaacgcaagatttttgcggagcgtatcacggatctggag
aatggggcagagcgaactaaaccgatagggtacaaggactacgagaaaactcagacccgg
gagaaagctcagactcgaacccagccgccaactcagccctcaacccagtctcccccgaag
cttagtgcagtaccttccgcgaagcccggtgcagtacctgcccggaagctttacttaaga
tttccttacgaagggacgcctcttctcgaagaggccctgccgatcctgcgtcattattcg
ggaacccatccggtgctcttctattttgagcaggataaaaaactgattcaaggaaaccgg
gaactttgggtgaatgatttggaggaattggttcaggccttgtcaaacatactaggggaa
agcaatgtggtatggaaggtcaatgccatgtaa
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