Desulfitobacterium hafniense DCB-2: Dhaf_2469
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Entry
Dhaf_2469 CDS
T00822
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dhd
Desulfitobacterium hafniense DCB-2
Pathway
dhd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Dhaf_2469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dhd03400
]
Dhaf_2469
Enzymes [BR:
dhd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Dhaf_2469
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Dhaf_2469
DNA repair and recombination proteins [BR:
dhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Dhaf_2469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ACL20497
UniProt:
B8FU83
LinkDB
All DBs
Position
2666207..2667028
Genome browser
AA seq
273 aa
AA seq
DB search
MPELPEVETIRRSLSQHILERRIEEILIRWPGAVEGYEEKTFADAVRGLKFQSIERRGKY
LLFTLEEGWSFIAHMRMTGRMVYHAQSQEPEKHTHVVLKLSSGEIHFTDTRKFGRLQLVR
TEERLQQPSLARLGPEPLEEGFSAAELGRRLAPRKLAIKAALLDQTLVAGIGNIYADEAL
FRAGIAPERCANSLTKEEIEKLYPAICQVLEEGIAANGTSFRDYQDANGERGDFQKELKV
YGRGGEPCKECGHTLVRIRLAGRSTVFCPCCQV
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactaccagaagtagaaaccatacgcagaagcctgagtcagcatattcttgag
cgaaggattgaggagatcttaattcgctggccaggtgctgtggaaggatatgaggagaaa
acctttgccgatgctgtcagagggctgaagtttcaaagtatcgaaagacgtgggaaatat
cttttgtttactttagaagaaggctggtccttcatcgcccatatgcgcatgacagggcgc
atggtttaccatgctcaaagccaggaaccggagaagcatacccatgtggtgcttaagcta
tcttccggggagattcactttaccgatacacgcaaattcggccggctgcagttggtgaga
acagaagaacgcctccagcaaccctccttagcccgcctgggtccggaacctttggaggaa
ggtttttccgccgcagaactgggacggcgtctggctccccgcaaactggccattaaagca
gctctgttggatcagacccttgtggcgggaatcggcaatatctatgcggatgaagcctta
ttcagagcgggaattgccccggagcggtgcgccaattccttgacgaaagaggagattgag
aagctttaccctgccatctgtcaggttcttgaggagggtatcgccgccaatggcacttct
ttccgggattaccaggatgccaatggggaaagaggggactttcagaaggaattgaaggtc
tatggacgtgggggagaaccctgcaaagagtgcggccatactctggtgagaattcgtctg
gccggcaggtctacggtgttttgcccttgctgtcaggtgtaa
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