Desulfitobacterium hafniense DCB-2: Dhaf_2509
Help
Entry
Dhaf_2509 CDS
T00822
Name
(GenBank) PAS modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
dhd
Desulfitobacterium hafniense DCB-2
Brite
KEGG Orthology (KO) [BR:
dhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dhd03000
]
Dhaf_2509
Transcription factors [BR:
dhd03000
]
Prokaryotic type
Helix-turn-helix
Other families
Dhaf_2509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
AAA_5
HTH_8
Mg_chelatase
AAA_2
PAS_4
PAS_9
Diguanyl_cycl_sensor
AAA
PAS
PAS_8
AAA_3
PAS_7
MCM
TIP49
Mga
IstB_IS21
AAA_16
DUF815
Motif
Other DBs
NCBI-ProteinID:
ACL20537
UniProt:
B8FUC3
LinkDB
All DBs
Position
2710778..2712868
Genome browser
AA seq
696 aa
AA seq
DB search
MPDTKENLHDAHNLILTNTGWEQLLECKKFFLKNHTLDPKEYACIRLEVAESWLRSHDLG
VNPYKSSLAEHLNSNEIARILAENKDLIEITKAVFVDLKIKDIMTSNYALYLFDKNGVLL
SHEGEKIKLISADYPESSIVGQVWSEATVGTCAHVLSMHLKKPVYIVGPEHYCTVFQNSC
TSAAPLTNEDNEIIGYLVVSYHIDFPLSHDSYYLSTYPLGLITAMAVAVENKLRFTKSYQ
LLKSAHHMQEVILSVIEEGIIITDNRGKIITINKEVVNIFNTAEEEIIGRTIDRFLGPQI
GEAVRNNETVDIEEAICSNNHDKSYLVLIRPLDKHGNYPNGAVLRVNPMEIINALVTNRT
GAFATYTFDKIIGKSKAIKETISLGKRFSLSNENILLTGESGTGKELFAQAIHNAHRPQG
PFIAVNCAAMPRELIESELFGYEGGSFTGAERRGRAGKIELAHGGTLFLDEIGDMPLEVQ
AILLRVLEDKKVMRIGGHTYKKVDFRLVAATNKDLERMSHENLFRSDLFFRLSILSIQLP
PLRKRDNDVEVLANYFIGKYCAKIKRKAPLISEEALEVLKSYGWPGNVRQLENSVIYAVN
LAQGDLIQCRHLPESLYAASSSPAENYRDPPGMTGSYTLENIYKIDVMEKILIENALYKT
RNNITKASELLGMAKSTLYRKAKELNIDMGTFKNSD
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgccagatactaaagaaaatttgcatgatgcacataatttaattctaaccaacacaggt
tgggagcaactactggaatgtaaaaaattctttttaaaaaaccatacccttgatcccaag
gaatacgcttgtattaggcttgaagtagcagaatcctggttgcgctctcatgatttagga
gtcaatccttataaaagcagtcttgccgagcatttgaattccaacgaaatagccaggatc
ctggctgaaaacaaagacctgattgaaattaccaaagccgtttttgttgatttaaaaata
aaggatatcatgacttccaattatgcgctttatttatttgataagaatggtgtcttgctg
agtcatgagggagaaaagatcaagttaatttctgcggattacccagagagttccatagtg
ggccaggtatggtcggaagcaaccgtcggtacctgtgcacatgttttaagtatgcatcta
aagaagccggtatatattgtcgggcccgaacactactgtactgtctttcaaaattcctgt
acatctgcagcacctctgaccaatgaggataacgaaatcatcggctacctggttgtaagc
taccatattgattttcccttgtcccacgactcctattatttaagcacctatcccctgggt
ctcatcacagctatggcggtagccgtagaaaacaagctgcgttttaccaagagctatcaa
ttgctgaaaagcgctcatcatatgcaggaagtaattttatccgtgattgaggagggaata
attattacggataacagggggaaaataattacgatcaacaaagaagtggtcaatatcttc
aatactgccgaagaggagatcataggcaggactattgatcgctttttaggcccccagatt
ggtgaggcggttcggaacaatgaaaccgttgatattgaggaagccatttgcagcaataat
catgacaaaagttatttagtgctcatacgtcctcttgataaacatggcaactatcccaac
ggtgcggttttgagagttaatcctatggaaataatcaatgcccttgttaccaatcgaacg
ggagcctttgctacctatacctttgataaaatcattggtaaaagcaaagccatcaaagaa
acgatttccttaggaaaacgcttttccttatccaacgagaatatccttctgactggcgag
agtggaacaggtaaagagctttttgctcaagccatccataatgcccatcgtccccaaggg
ccatttattgccgtaaattgtgcggcaatgccccgggaacttattgagagcgaactgttt
ggttatgaaggaggcagctttaccggcgctgaacgcagaggcagagcggggaagatagaa
cttgctcatgggggcaccctttttcttgatgagataggggatatgcccctcgaggtccag
gctatcctcttaagagtgctcgaagataaaaaagtgatgcgaattggaggacacacttat
aaaaaggttgatttcaggctggttgcagccacgaataaagatttggagagaatgagccat
gaaaatttattcagaagtgatttgtttttccggctatccatcctttccattcagcttccg
cctttaagaaagcgggataatgacgttgaggttttggcaaattactttatcggtaaatac
tgtgccaagatcaagcgcaaggctcccctcatcagtgaagaggctcttgaggttctgaaa
agttatgggtggcctggaaatgtaaggcaacttgaaaatagtgttatttatgcagtgaat
ttagctcaaggggatttaatccaatgcaggcatttgcccgaatcattatatgccgcttct
tcttcaccagcagagaattatagggatcctcccggtatgaccggcagctacactctcgaa
aacatctataaaattgatgttatggagaaaatacttattgaaaacgccctctataaaacc
agaaacaatattaccaaagcttccgaactattaggaatggctaagtcaacactgtatcgc
aaagcaaaagagcttaatatagatatgggaacattcaagaattctgattaa
DBGET
integrated database retrieval system
