Desulfitobacterium hafniense DCB-2: Dhaf_2832
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Entry
Dhaf_2832 CDS
T00822
Name
(GenBank) recombination helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
dhd
Desulfitobacterium hafniense DCB-2
Brite
KEGG Orthology (KO) [BR:
dhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dhd03400
]
Dhaf_2832
Enzymes [BR:
dhd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dhaf_2832
DNA repair and recombination proteins [BR:
dhd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Dhaf_2832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DEAD
AAA_22
ResIII
AAA_16
TYW2_N
Motif
Other DBs
NCBI-ProteinID:
ACL20856
UniProt:
B8FXD7
LinkDB
All DBs
Position
complement(3043677..3047855)
Genome browser
AA seq
1392 aa
AA seq
DB search
MNNPKWTPAQQAAIDLKGQLLVAAAAGSGKTAVLVQRLFKQITDVDEQVDVDRFLVVTFT
KAAAAEMRERIGKALDEALFGAAEPAQVEHLLQQRALLYRASITTLHSFCMELIRQYFYL
IELDPAFRVADEAEADLLRQDTLEDLFEAYYGEETPAFQSLVDAFGTDRDDQPLMASILR
LHEFAMSQVHPGEWLEHLPAAYDWHSLDDLMESPWGQVVRQGVRDKVEEGLILLERAYRL
AELPGGPVHYLPVLEDDQSRLGFLREMAEKGTWSDIETAFKSAAAFPGLPRGSKKNLPDS
LIDEENSKRLREESKKARDEAKKKLEEIKNTVFSVPLTDQLPFLNKMGELVGTLAQVTQH
FAREYQKAKRQRNCVDFSDLEHYALQLLAKDKQPTEIALKLQAYYAEVLVDEYQDINPVQ
ERILQLVSRQEEGKANLFMVGDVKQSIYRFRMADPGLFLRKYGEFPHYQEGGGAAPNLVI
DLNQNFRSRPEVIQGINYLFYQIMTEGAGEIVYDEQAALRPGAKFVSDGELRTAEGPIEV
HLFDPKAIDLSLGQKRGAEDAATEVDSPAKGEGEEFEQNREPESGDDESSLEEAETARIE
ARLVAARIQKMVLEREFQIHDKELGDYRPVQYADIVILMRSLASVASVYAEEFQKAGIPV
YAETNSGYFGTNEVDTVLSLLKIIDNPRLDIPFAAVLRSPLVGMNGTELGKLRSLLPQGD
FYETLVLTFWAGDAHRQEEGHEFYSEIREILGKHWESLPQLEVKVRHILETSPEIKEKVD
AFFPKLQEWRHRSRRTSLADLLWHLYEDTGYLAYVGTLPAGAQRQANLRVLYDRACRYEA
TNYRGLFRFLRFLEKFQSQGKDLGNASIVGEKENVVRFITVHSSKGLEFPVVFIAGLGKK
FNTRSLSSQLLLHSHLGVGIPLIDIENQVRYPSVIQYAVKERLWQEALAEELRILYVALT
RGKERLFLFGHQHKLAEAINKWRSLALSCPDTAFPDGQLRGAKTYLDWLGPALVRHPEDL
FKLGSFPTASELPDSSSQWKVILHDQIAGKGPVQEATSSQDEIILPDQETLGEREASEET
EIPGETEASGKTEIPGETKNSEETKTSEDKKNLEAQTPETADLDTKNLQEEVFRQLNWQY
PYPEGVNQSAKTSVSELKRQSLWYMDNEYSSPSSSSSSSPSALSAPSFLRPQFIVSRKEL
TPAERGTAVHAAIQHLPLALWRDTWEELAQEVRESMLQEHIDSLIRREILSAEQGGAVSV
SQLKNLLDSTSGKRLWEAEEVRREVPFTLSLRLRAQKEPVLVQGIIDAVLLSHQEHEAQV
MDFKTDNLAGVPDPELVLTQRYGLQLGLYALAVERLLKVPVRECIIYATSLNREFVMQRE
AVQAALESVVIV
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcccaaatggaccccggcccagcaggcggccattgacttgaaggggcagctt
ctcgtagcggcggctgccggttcgggtaagaccgcagttcttgtccaaaggctcttcaag
cagattacggatgtggatgagcaagtggatgtggatcggtttctggtggtgacctttacg
aaagcggccgccgcagaaatgcgggaacgcatcgggaaagctctggatgaagcgctcttt
ggggcggcggagcctgctcaggtggaacacctcctgcaacagagggccttgctttatcgg
gccagtatcaccaccctgcactcattttgtatggaactgattcgtcagtatttttacctt
attgagctggacccggcttttcgcgtagccgatgaagcggaagcggacctgcttcgccag
gatactcttgaagatttgtttgaagcgtattacggggaggagacaccggcctttcaaagc
ctggtcgatgccttcggcaccgatcgtgatgatcagcctttgatggcctccattcttagg
cttcacgaatttgccatgagccaggtccatcctggggagtggctggaacacctgccggca
gcgtatgattggcacagccttgatgacctgatggaaagcccctgggggcaggtggtccgg
cagggggttcgggataaagtggaggaaggtcttatcctcctggagcgggcctatcggctg
gccgagttgccgggaggtcctgttcattatctgcctgttctggaagacgatcaatccagg
ttgggttttctgcgggaaatggcggagaaggggacttggagtgacatcgagacggccttt
aagtcagcggcagcctttcccggcctcccccggggaagcaaaaaaaatctgccggactcc
ttgattgatgaggaaaacagcaagcgcttgcgggaagaaagtaaaaaagcccgtgatgag
gccaaaaagaagctggaagaaatcaagaatacggtgttttcagtacccctgaccgatcag
ctcccgttcctgaacaagatgggggaattggtcggcactctggctcaggtcacccaacac
tttgcccgggagtatcaaaaagccaagcggcaaaggaattgcgtggatttttccgatctg
gaacactatgccttacagctcctggccaaggataaacagcctacggaaattgccttaaaa
ctccaggcctactatgcggaagttctggtggatgaatatcaggacatcaatcccgttcag
gagcgtattttgcagctggtttcccgtcaagaggaggggaaggccaatctgttcatggta
ggggatgtcaagcagagcatttatcgtttccggatggccgatcccggactttttctgcgc
aagtatggggagtttcctcattatcaggaaggggggggagctgcccctaatttggtcatt
gacctcaaccaaaatttccgcagccgccctgaagtgatccaagggatcaattatcttttc
tatcagatcatgacggagggagcaggggagatcgtctatgatgagcaggctgccctgaga
ccgggagctaaatttgtctccgatggggagcttagaaccgctgaaggccccattgaagtt
catttatttgatcctaaggccatcgatctttccctgggtcagaaaagaggagctgaagat
gcagccacggaagtggattcaccggctaagggtgagggtgaggaatttgagcagaatcgg
gagccggaatcaggcgatgatgaatcatcactggaagaggcggaaacagcccgtattgaa
gcccgtttagtggcagcccgcattcaaaaaatggttctggagagggaatttcagattcat
gataaggaactgggcgattatcggccggtacagtatgcggatatcgtgattcttatgcgc
tccctggcctcggtagcctctgtgtatgccgaagagttccagaaggcgggaatccctgtc
tatgcagaaaccaacagcggttactttggaaccaatgaggtggacacagtcttatccttg
ctcaaaatcatcgataacccacgtctggatattccctttgcggcagtgctccgttctcct
ctggtagggatgaatggaacggagttagggaaattgcgctcgctgcttccccaaggagat
ttttacgaaaccctggtcctgaccttttgggcaggtgatgctcaccgacaagaagagggg
catgaattttactcagaaatcagggagattttaggcaagcactgggagagcttaccgcaa
ctggaggttaaagtcaggcatatcctggagacatcacccgagatcaaagagaaggtggat
gcctttttccccaagctgcaggagtggcggcaccgttcccggcggacctctctggccgat
ttgctgtggcatctctacgaagataccggatatctggcttatgtaggaaccttgcctgcc
ggtgcacaacgtcaagcgaatttacgagttctctatgatcgggcctgccgttacgaagcg
acaaattatcggggcttattccgtttcctgcgtttcctggagaaatttcaaagccagggc
aaggatctgggcaatgccagcatagtgggggaaaaagagaacgtggtccgcttcataacc
gtgcattccagtaaagggctggaattcccggtcgtcttcatagccgggttagggaagaaa
tttaatacccgcagcctcagcagtcagctcttgcttcactcacacttaggggtgggcatt
cctttaatagatatagagaatcaggttcgttacccatctgttattcaatatgccgtgaaa
gagcgtctatggcaggaagcccttgccgaagagctgcggatcctttatgtagcccttacc
cggggcaaggagcgtctcttcctctttgggcatcagcataagcttgcggaggctatcaac
aaatggcggagcttagccctgtcctgccccgacacggcctttcccgacggtcagctgcgg
ggggccaagacctacctggattggctcgggccggctttagtacgtcatcctgaggatttg
ttcaaactcggctctttccccacagccagtgaacttcctgatagctcatcccagtggaaa
gtgatccttcatgatcagatcgccggcaagggacctgttcaagaggcaaccagctctcaa
gatgaaatcattctcccagatcaagaaacccttggagaaagagaagcttctgaggaaacg
gaaattcccggagaaacggaagcctcgggaaaaacggaaatccctggagaaacaaaaaac
tctgaagaaacgaaaacctctgaggataagaaaaaccttgaagcccaaacgcctgaaacg
gcggacttggatactaaaaatttacaggaggaagttttccggcagcttaactggcagtat
ccttaccctgaaggggtcaatcaatccgctaagaccagtgtcagtgaattgaaacggcag
tcattatggtacatggataatgaatactcgtctccatcttcatcctcatcttcatctccg
tccgccttgtccgcgcccagttttctgcgccctcaattcattgtgtcccggaaggaattg
acgcctgcggaacgaggcacagcagtgcatgccgccattcagcatttacccttggcccta
tggcgggatacttgggaggagctggctcaggaagtccgcgaaagcatgcttcaagagcat
atcgactccttgatccggcgggagattctcagtgcagagcaggggggagcggtatccgtt
tcccagctaaagaatctgctggactccaccagcggcaaacgtctctgggaagctgaagaa
gtgcggagagaagttccctttaccctctccttgcgtctcagggcccaaaaagaaccggtg
cttgtacagggcatcatcgatgcagtgctgctctctcatcaggagcatgaggcccaggtt
atggattttaagactgataatttagcaggggtgcccgacccggagctggttttaacccag
cgctacggactccagctggggctgtatgccctggcggtggaaaggctgctcaaggtccct
gtccgggaatgcatcatctatgcaacctcccttaatcgtgagtttgttatgcagagagag
gctgttcaagctgctctggagtcggtggttatagtgtag
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