Desulfitobacterium hafniense DCB-2: Dhaf_3073
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Entry
Dhaf_3073 CDS
T00822
Name
(GenBank) DEAD/DEAH box helicase domain protein
Organism
dhd
Desulfitobacterium hafniense DCB-2
Brite
Spliceosome [BR:
dhd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
Dhaf_3073
Complex C
U4/U6.U5 tri-SnRNP related factors
Dhaf_3073
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Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
nSTAND3
DEXQc_Suv3
Helicase_C
AAA_22
AAA_30
PhoH
AAA_16
IstB_IS21
AAA_19
AAA_25
PRKG1_interact
Sigma54_activat
ATPase
Motif
Other DBs
NCBI-ProteinID:
ACL21096
UniProt:
B8G035
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All DBs
Position
3289819..3292107
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AA seq
762 aa
AA seq
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MRKTPGRNELIFVSERTYHGLVLDRFQEEALDAIDEGQSVIVAAPTGTGKTLVADYLVEK
VMAEGRRIIYTAPIKALSNQKFKDYKQLFGVDQVGILTGDVVLNSEAPLLIMTTEIFRNQ
VITNDPSLESVSYIIFDEIHWLNDEERGTVWEESIILAPPHMKLLGLSATIANAQQLVDW
IGTIRQEDVALIQENRRIVPLEYYYFSRDTGLVNYEKLWKYYRQQIQSAPPTEGSLFAPT
NHLDLIKVIQKQYLPALYFVFSRKQCADKASELAYLTNYLNPQEKRQVEDAFLEHFGPES
DWSPSTRLLRRLAVKGIAFHHAGLMPSQKVLVEELFLKRLVHVLYCTETFSVGINYPVRS
VCFDTLNKFDGRNFRPLANHEFFQMSGRAGRRGLDERGYSFALVDLNYMEKSPPPRFNIN
RLEPLTSQFKLSYNTVLNLQATLSYEQIQIYFQKSFAAHSNLHTHGQLIAELAQLEEQFN
GKGEHVCRHTDSYACPVKYLPKKKELDRLKRAYQALGPRRQNRVYGREMARKIKNWEKLL
ATTPQKCPNAKLALCEEESKQRRKLQQRMIEIRKDLKTLPDQNFFFNEFQFKKNQLIQMG
YIREDELLPRGECACHIYVQELLVTELIFSGIMETLDDDQLNALLSAIDFEARKNDYFQR
LPVLDWTPLQDLVRYIQSVCGPESVRYDPRVAVIVYSWSQGVSFAEVQRLSNLDEGDIIS
VIRRTIDLLRQMRDAVKEPALLQRLKLCMDKLDRDEAAVLAL
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaactcctggaagaaatgagttgattttcgtgtctgaacgtacataccacggc
ttagttttggatcggtttcaagaagaagccttagatgctattgatgaagggcaatctgtc
attgtcgcagctcccaccggtacgggaaagactcttgtcgccgattacctcgtggaaaaa
gtcatggccgaaggacgccggattatttataccgccccgattaaagccttaagcaaccaa
aagtttaaggactataagcagctttttggcgtagatcaggtgggaattttaacgggagac
gtggtgctgaactcggaagctcctttgctgatcatgaccactgagattttccgcaatcag
gtgatcaccaatgatccctccttagaatcggtgtcctacatcatctttgatgagattcat
tggcttaatgatgaagagcggggtacggtctgggaggaatcgattatcttagctcctccc
catatgaaattattaggcctcagtgccactatcgccaatgcccagcaattggtggattgg
atcggaaccatacgtcaggaagatgtagcattaatccaggaaaaccgccgcattgtgcct
ttagaatactattatttttccagagataccggtctggtcaactacgagaagctctggaag
tattatcgccaacagatccagtctgcaccgcccacagagggcagtttatttgcccctacg
aatcacctggacttaatcaaagtaatccaaaagcaatacctccccgccctttattttgtt
ttcagccgcaagcaatgtgctgataaggcttctgaactggcctacctcaccaattattta
aaccctcaggaaaaaaggcaggtcgaggacgctttcctggagcatttcggaccggaaagc
gattggtccccctccaccaggctgctgcggcgcttagctgtcaaagggatcgcctttcac
catgccggtctgatgccctcgcaaaaagtgttggtggaggagcttttcctcaaacgcctc
gttcatgttctctactgcaccgaaactttcagcgttggcattaactatcctgttcgctcc
gtctgctttgataccctgaataaattcgacggccgcaactttcgccccctggccaatcat
gaattcttccaaatgtccggacgggccggacgccggggattggatgaacggggctactcc
tttgctttagtcgatctgaattacatggaaaagagccctcccccccgcttcaatatcaac
cgcctggagcccctcaccagccaatttaaattaagctataacacggtcctcaatcttcag
gccaccctttcttatgaacaaatccagatttactttcaaaagagctttgccgcccatagc
aatctgcatactcacggtcaattgattgctgagctggctcaactggaggagcaattcaac
ggcaaaggggagcatgtgtgccggcacaccgactcttatgcctgccctgtgaaatatctg
ccgaaaaagaaagaacttgatcgtctcaaacgggcttatcaagccttgggtccccgccgc
caaaaccgggtctatggccgggaaatggcacgcaagattaaaaactgggaaaagcttctg
gccacaaccccgcaaaaatgccccaacgccaagctggctctttgcgaggaggaaagcaaa
caacggagaaagctgcagcaaaggatgattgaaattcgtaaagatctgaaaaccctgccg
gatcagaacttctttttcaatgaattccagtttaagaagaatcaattaatccaaatgggg
tacatccgggaggacgagctgcttccccgcggtgaatgtgcctgtcatatttatgttcag
gaattattggtcacggagctgattttttcaggtattatggaaactttagacgatgaccag
ttgaatgccttattatcggccattgattttgaggcccgcaagaacgattactttcaaagg
ctccccgtcctggactggactccgctgcaggatttagtccgttatattcagagtgtctgc
ggcccggaatctgtccgctatgatcctcgggtagcggtcatcgtctattcctggagccaa
ggggtttcctttgctgaagttcagcgtttgtccaatctggatgaaggggatattatctca
gttattcgccgcaccattgacctgctgcggcagatgagggatgcagttaaggagccggct
ttgcttcagcgcttaaagctttgcatggacaaactggatcgggatgaagctgccgtcctt
gctttatag
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