Desulfitobacterium hafniense DCB-2: Dhaf_3385
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Entry
Dhaf_3385 CDS
T00822
Name
(GenBank) hydroxymethylbutenyl pyrophosphate reductase
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
dhd
Desulfitobacterium hafniense DCB-2
Pathway
dhd00900
Terpenoid backbone biosynthesis
dhd01100
Metabolic pathways
dhd01110
Biosynthesis of secondary metabolites
dhd03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
dhd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Dhaf_3385
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Dhaf_3385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
dhd03011
]
Dhaf_3385
Enzymes [BR:
dhd01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
Dhaf_3385
Ribosome [BR:
dhd03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Dhaf_3385
Bacteria
Dhaf_3385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
S1_2
OB_RRP5_4th
DUF7205
MRP-S35
CsrA
Motif
Other DBs
NCBI-ProteinID:
ACL21403
UniProt:
B8G2Q3
LinkDB
All DBs
Position
complement(3618912..3620897)
Genome browser
AA seq
661 aa
AA seq
DB search
MKIIRAEKAGFCFGVKRALDMAERTVQSSSTASLGPLIHNQQVVEKMEKQGVRVVGEVKE
TQAGDTLIIRSHGVPPDIYEEARRCQVKVVDATCPFVQKAQRLAAESSQSGQVVVVGDRQ
HPEVQGILGWAGGNAIAIETLEEARELPFYEQLSVLAQTTQPAANFHGIVDELKTHTHAL
KVHNTICNATEERQTVARELAGKVDVMIVVGGKNSANTRKLAGICSERTQTYLIETADEL
EDNWFTGVVTVGLTAGASTPDWIIEEVYRKMSTMENKETHEMMNMEDWAEGMQNLHRGAL
VTGTVVKINHDEVFVDLGWKSEGVIALKELTVASDLQTSDIVAIGDQISAVVLRVENEEG
NPVLSKRRADEMAAVDKLKELAESKEEIQGKVADVVKGGLIVDVGMRGFVPASQIQPGYV
EDLNQFKGQTLRLRVIEFDPAKRRVVLSQKEILQEEQAAKKEHLLATLQEGDVVSGVVKR
LAQFGAFVDIGGVDGLLHVSDIAYTRIKHPSEYVNVGDEVEVQILKVDKEQGKISLGLKQ
LKPSPWESAPEKYALGSLVTGKVVRIAPFGAFVQLEDGIDALIHISQLSEKRVNKVEDVV
KVGDMVQAKVIECKPEEKRISLSIREAAAEAQATEDAELLASQPEAPQVTIGDVVQSESE
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatcatccgggcagaaaaagccggattttgctttggtgttaaacgagctttggat
atggcggagcgaacagttcaatcttcaagtaccgcttctttgggtcccttaattcataac
caacaggttgtggaaaaaatggagaaacaaggggttcgtgtcgtcggggaagtgaaggag
actcaagccggggacaccttgattatccgctcccacggagtgcctccggatatctatgag
gaagcccggcgctgtcaagtcaaggtggtggatgctacctgcccctttgtgcaaaaggct
cagcggctggcggcagaatcttcccagtccggtcaggtcgtggtggtgggggatcggcag
cacccggaagtccaggggattttaggctgggccggcggcaatgccattgctattgagacc
cttgaggaagccagggaactccccttttatgagcagctctccgtgcttgctcaaacaacc
cagccggctgctaatttccacgggattgtggatgagttaaaaacccatactcacgcgctc
aaggtacataatacgatttgtaatgccactgaagagcggcagaccgtggcccgtgaattg
gccggcaaagttgatgtgatgattgtggttgggggcaaaaacagtgccaacaccagaaaa
ctggcggggatttgctctgaacgaactcagacctatctcatcgaaaccgccgacgaattg
gaagataactggttcacaggggtggtcaccgtaggattaacggcgggagcctcgacacca
gattggattattgaggaggtttataggaagatgtcaacaatggaaaacaaggaaactcat
gaaatgatgaatatggaggactgggccgaaggaatgcaaaatttgcaccggggagctctg
gtcacaggaactgtggtgaaaatcaatcacgatgaagtatttgtcgatttaggttggaaa
tcggagggcgttatcgctttgaaagagcttaccgtagcttccgatctgcagaccagcgat
attgtagccatcggcgatcaaatcagcgccgttgttctccgtgtggagaatgaagaaggg
aacccggtgctctctaaacgccgggctgatgaaatggctgccgtggataagctgaaagaa
ttagcggagagtaaagaagagattcaaggaaaagtggccgatgtggtcaaaggcgggctg
attgttgatgtaggtatgcgcggctttgttcctgcctctcaaattcaaccgggttacgtg
gaggatttgaaccaatttaaaggccaaaccctccgtctcagagtgatcgagtttgatccg
gctaagcggcgcgtggtcctttcccagaaagaaatcctccaagaagagcaagcggctaag
aaagagcatctcctggcgacccttcaggaaggggatgtggtcagcggtgtagtgaagagg
ctggctcagttcggtgcttttgtggatatcggcggagtggatggactgcttcatgtttcc
gatatagcctatacccggattaagcatccttctgaatatgtcaatgtgggggatgaagta
gaagtccaaatcctcaaagtggataaagagcagggcaaaatttctctgggtctgaaacaa
ttaaaacccagcccctgggaaagtgctcctgaaaaatatgccttaggctctttggttact
ggaaaagtagtgcgcatcgcccccttcggagcctttgtccaactggaggatggcatcgat
gctctgattcatatttcccagctttccgaaaagcgggtcaataaagttgaagatgtagtg
aaagtcggtgacatggttcaggctaaggtcattgaatgcaagccggaagagaagcggatt
agcttaagtatccgtgaagccgctgccgaagcacaggctacggaagatgcagaactcttg
gccagtcagcctgaagcacctcaggttaccatcggtgatgtggttcaatctgaatcagaa
tcctaa
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