Desulfitobacterium hafniense DCB-2: Dhaf_3455
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Entry
Dhaf_3455 CDS
T00822
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dhd
Desulfitobacterium hafniense DCB-2
Pathway
dhd00061
Fatty acid biosynthesis
dhd00071
Fatty acid degradation
dhd01100
Metabolic pathways
dhd01212
Fatty acid metabolism
dhd02024
Quorum sensing
dhd04146
Peroxisome
Module
dhd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dhd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Dhaf_3455
00071 Fatty acid degradation
Dhaf_3455
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Dhaf_3455
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dhaf_3455
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dhd01004
]
Dhaf_3455
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dhd04147
]
Dhaf_3455
Enzymes [BR:
dhd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Dhaf_3455
Lipid biosynthesis proteins [BR:
dhd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Dhaf_3455
Exosome [BR:
dhd04147
]
Exosomal proteins
Exosomal proteins of breast milk
Dhaf_3455
Exosomal proteins of breast cancer cells
Dhaf_3455
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ACL21473
UniProt:
B8FQ12
LinkDB
All DBs
Position
complement(3688019..3689770)
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AA seq
583 aa
AA seq
DB search
MSQENKRHEFPWRAQYDQQVPHYLSYPEETVDGLFRKSVQKNSGEVALIYFNKKMSYSDL
GNKVERLAGSLQKLGIDPGDRVALLLANCPQYVIAYYAILAIGGVVVPVNPLSTESELLH
IFRDAQVKAAICLDLLAERLENVRDICHQAGETQLLKHTFYTALNEYMPFPLKFLYPFTR
KLSPGGKERLKVAGRFKDLLNEGNGPVLKDYPSQKVDVRKDIAVLIYTGGTTGRPKGVML
SHYGLLANAYQAIAWVQMGSKDRLVTVLPAFHGFGMSVCMNAPLFSGASTILIPRFEAKD
VLKAIHKHKPTYFAGVPTMYIGMINYPQLKRYSLSSLVGCFVGAAALAPEVKRSFEELTG
ARLMEGYGLTEGVNALCCNPLRGENRTGSIGFPFPDVDFKIRDIDTGEEELPPGESGELV
IQCPDLMLGYYNRPEETAYALRDGWLYTGDIATMDEDGYFYLVDRKKDMIITGGFNVYPR
EVEDVLYEHPAVREACVIGVKDGYSGEKVVAFVSLKDGAAATEQDVIAFCRKHLVPYKVP
KTVEFRTDLPKTAIGKILRRALRDTPPAEGEAKQSAKEAAATK
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaggaaaataaaaggcatgaatttccctggagagctcaatacgaccaacaggtt
ccccattacctaagctatcctgaagagacggtggatgggttattccgcaaaagtgtgcaa
aagaactccggagaggttgccctaatctattttaataagaaaatgagttacagtgatttg
ggcaataaagttgaacgcctggcaggttccctgcaaaagctgggtattgatcccggggat
cgggtggcccttttgctggctaattgtccccaatacgtgattgcttattacgctatcctt
gccattggcggggtggtcgttcctgtcaatcctctcagtaccgaatcagaattattgcat
atttttcgggatgctcaggtcaaagcagccatttgtctggaccttctggccgagcggctg
gaaaatgtgagagacatttgtcatcaggccggagagacccaattgctgaagcataccttc
tatacggctctcaatgagtatatgccttttcctcttaaatttctttatccattcacacgg
aagctgtccccgggaggtaaggaacgcctcaaagttgccgggaggtttaaggatctgctg
aatgagggcaacggtcccgtgctaaaagattatccgtcccaaaaagtggatgttcgtaag
gatatagcggtcctcatctataccggcggcactaccggacgccccaagggagtgatgctt
tcccattatggtttgcttgccaatgcttatcaggcgatagcctgggttcaaatgggcagc
aaggatcgtttggtcactgttctcccggcctttcatgggtttggcatgtccgtgtgcatg
aatgctcccttattctccggagcttcaacgattctgattccccgctttgaagcgaaagat
gtcctgaaagccattcacaagcataagcccacgtattttgccggagttccgacgatgtat
ataggcatgattaattacccccaattaaaacgctatagcctttcctccttagtggggtgt
ttcgtgggggcggctgctctggcccccgaggttaaacgaagcttcgaagagcttaccgga
gccaggctgatggagggatacggtctcactgaaggggtcaatgccctctgctgcaatccc
ttgcggggggaaaacagaaccggcagcatcggttttcctttcccggatgtggactttaaa
atcagggacattgacaccggtgaagaggagctgcctcccggtgaatcgggagaactggtg
attcagtgtccggacttaatgctgggctactataaccggccggaagagacggcctacgct
ttaagggatggctggctatacaccggagatatcgcgaccatggatgaagacgggtatttt
tatcttgtggaccgtaaaaaggatatgattatcaccggtggcttcaatgtctatccccgg
gaagtagaggatgtgctgtatgaacacccggcagtcagggaggcctgtgtgatcggggtt
aaggacggttacagcggggaaaaggtagtggcttttgtcagccttaaagatggagctgcc
gctacagagcaggatgtcatcgccttttgccgcaaacacctggtcccttataaagttcct
aaaaccgtagaattccgtaccgatttacctaagacggctattggcaagatcctgcgccgg
gccttacgggatactcctcctgcagaaggggaagcaaaacagagtgccaaggaagcggca
gcgacgaagtag
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