Desulfitobacterium hafniense DCB-2: Dhaf_3673
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Entry
Dhaf_3673 CDS
T00822
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dhd
Desulfitobacterium hafniense DCB-2
Brite
KEGG Orthology (KO) [BR:
dhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dhd03016
]
Dhaf_3673
Enzymes [BR:
dhd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Dhaf_3673
Transfer RNA biogenesis [BR:
dhd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Dhaf_3673
Prokaryotic type
Dhaf_3673
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
ACL21690
UniProt:
B8FR03
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All DBs
Position
complement(3907856..3908740)
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AA seq
294 aa
AA seq
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MDGVINVLKPPGMTSSDVVVRLRRILNTRKIGHTGTLDPEVTGVLPICVGKATRLAEYIT
NQGKSYRCEMIFGITTDTQDASGEILHKEPAQVSAEDFQRLIPQYLGSIRQIPPMFSAVK
HQGKRLYELARQGLEVERTSREIHIDHLQLMEWIAGEYPKAIFEVDCSKGTYIRTLCHDM
GQTLGCGAHMSALIRLRSGPFHIQESLSLETIQNFMEQDDYSFLIPYIQVLDLPRVSLSP
QRALAFRNGLSTAKSQIEVGAEIGEGCEVQVFSEGNFLGIGIWREQALCPYKVF
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
ttggacggagtcattaatgtactcaaacccccagggatgacttcttctgatgtggtcgtt
cgcttaagaagaatattgaacacccggaaaattgggcatacgggaaccttggatcccgag
gttacgggggtattgcccatttgcgtcggtaaagcaacccgcttggctgaatatatcacc
aatcagggaaaatcctaccgttgtgagatgatttttggcataacgacagacacccaggat
gcttccggagagattctccacaaggagccggctcaggtgagtgctgaggattttcaacgg
ctcattccccagtatcttggttccatccggcagattccacctatgttctcggcggtaaaa
catcaagggaaacgtctttatgaattagcccgtcagggtctggaagtggaaagaacatcc
cgggaaatacacatcgatcatttgcagcttatggaatggattgcaggtgaataccctaag
gcgatttttgaagtggattgttcaaagggcacctacatacggacattgtgccatgatatg
gggcagactttagggtgcggggcacatatgtcagcgctgatccgcctccgttccggaccc
tttcatattcaggagagtctatccctggagacgattcaaaactttatggagcaggatgat
tattcattcctgattccttacatccaagtattggacttaccccgggtgtccttgtctccg
caaagagcgttggcctttcgcaatggactttcgacagcgaaaagtcaaattgaggtcggg
gctgagataggtgaggggtgcgaagttcaagtctttagtgagggaaattttttaggtata
ggaatttggagagagcaggccctctgtccttacaaagttttttaa
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