Desulfitobacterium hafniense DCB-2: Dhaf_3679
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Entry
Dhaf_3679 CDS
T00822
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
dhd
Desulfitobacterium hafniense DCB-2
Brite
KEGG Orthology (KO) [BR:
dhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dhd03021
]
Dhaf_3679
03009 Ribosome biogenesis [BR:
dhd03009
]
Dhaf_3679
Transcription machinery [BR:
dhd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Dhaf_3679
Ribosome biogenesis [BR:
dhd03009
]
Prokaryotic type
rRNA transcription factors
Dhaf_3679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_NusA_C
Motif
Other DBs
NCBI-ProteinID:
ACL21696
UniProt:
B8FR09
LinkDB
All DBs
Position
complement(3913624..3915105)
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AA seq
493 aa
AA seq
DB search
MNMEFIEALHELEKDRGISADILFEAIEAALISAYKKNFASLQNVRVHIDRMTGEFKVFA
RKNVVEEVEDSRTQVSMEEAQKIDPNYAIDDVVEYEVTPREFGRIAAQTAKQVVVQRIRE
AERGMIYDEYINREGDIVTGIVQRYDQKNVIVDLGKVEAILTAQEQIPGETYQPFERIKT
FVVEVKKTTKGPQVMLSRTHPGLIKRLFELEVPEIHDGLVEIKGVSREAGARSKIAVYSR
DANVDPVGACVGPKGSRVQTIVTELKGEKIDIVNYSTDPEEFVANALSPAKVVGVYPKPN
EKVALVVVPDYQLSLAIGKEGQNARLAAKLTNWKIDIKSESQALAQNLIPDKNEVQGEYE
EYDEFADYAEYENYDEYEDYSEYDDYEENEDYDENATYGENYDDELVYDENDQYEEFDAY
QNEELPYEESEDYAATPDNGEPKAENAEENYAYTESGDKEERLTERDRSMMKYFEADEKN
SRKEKKKKAKGKR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaatatggagttcattgaggccctccatgaattggagaaagacagagggatctcagcg
gatattctgtttgaagccattgaagcggccctgatatctgcttacaagaaaaattttgct
tcattacagaatgtccgggtacatatcgaccgtatgactggagagttcaaagttttcgcc
cggaaaaacgtggtggaagaggttgaagattcacgaactcaggtaagtatggaagaagca
cagaagattgaccccaactatgccatcgatgatgtggtggaatacgaagtcacgccccgt
gaatttgggcggattgcggctcagacagctaaacaagtagtagtgcaaagaattcgtgaa
gctgagcggggcatgatttacgatgaatatatcaaccgggaaggggatatcgttaccgga
attgttcagcgctatgatcagaaaaacgtcattgttgatttaggtaaggtagaggccatt
ctgacagcacaggaacaaattcccggtgagacttatcaaccctttgagcggattaagacc
tttgtggtagaagtcaaaaaaacaaccaaagggcctcaggtcatgctctcccgtacccac
ccgggtctgattaaacgtttgtttgaactggaagtgccggaaatccatgacggactggtt
gagattaaaggtgtgtcccgggaggcgggagcccgctctaaaatcgctgtttattcccgg
gatgccaatgtagatcctgtgggggcttgcgtaggaccgaaaggcagccgggttcaaacc
attgttaccgagttgaagggtgaaaagatagacatcgtcaattattccacagatcctgag
gaatttgtggctaatgccctttccccggccaaagttgtgggagtataccctaaacctaat
gagaaagtggctttggtcgtagttcccgactatcaattatccctggcgatcggcaaagaa
ggtcaaaatgcccgtttggccgccaagctgaccaattggaagattgacattaagagtgag
tcccaggccctggcccaaaatcttattcccgataagaatgaagtccagggagaatacgaa
gagtacgacgaattcgctgattatgcagagtatgaaaactacgatgaatatgaagactat
agcgaatacgatgactatgaagagaatgaggactacgatgaaaacgcgacctatggggag
aattatgatgatgagctggtttatgatgagaatgaccagtatgaggaattcgatgcttat
caaaatgaagaacttccctacgaagaaagcgaagactatgcagcgactccggataacggg
gagcctaaggccgaaaatgctgaggaaaactatgcctacacagagtcaggcgataaggaa
gaacgactgacggaacgggatcggtccatgatgaaatactttgaagcggatgagaaaaac
agccgcaaggagaaaaagaagaaagccaaaggcaaaaggtag
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