Desulfitobacterium hafniense DCB-2: Dhaf_4069
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Entry
Dhaf_4069 CDS
T00822
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
dhd
Desulfitobacterium hafniense DCB-2
Pathway
dhd00550
Peptidoglycan biosynthesis
dhd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dhd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Dhaf_4069
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dhd01011
]
Dhaf_4069
Peptidoglycan biosynthesis and degradation proteins [BR:
dhd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Dhaf_4069
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
ACL22078
UniProt:
B8FT62
LinkDB
All DBs
Position
complement(4318272..4320320)
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AA seq
682 aa
AA seq
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MSPYVVMRKRIAFLFFCVSAFLVVLIVRLAFVQLAQGAILSDKADESHYRGVPVAAKRGN
IEDRNGEVLAMSVSTETVYAVPAQVRSSGRAEEIAHALSGLLEMGPEQVMERITKRSALE
YVKKRVTAEVAAQVRALELPGIGITEDSVRYYPNSTLAAHIIGFAGIDNQGLEGIELTRD
SELNGVPGAVLTEFAANGIPLPFANQMYVSPKNGNTVRLTIDKNIQAFAERELQKLMSGQ
GDNMNGQVPKSGTILVMDPNTGQVLALASAPTYDPNYYNNYDQSTRRNIAIQNGYEPGST
FKIITLAAALEEKKISPQEGFFDPGGVTILGKTVHCWKRGGHGSQTFTQVVENSCNPGFV
AMGQRLGMDKFYKYLHDFGFGQKTGIEMSGEAVGILAGKKRATALDLATMSIGQTNNVTA
IQLLTAVSAVANGGNLMKPQLVKEIVGPSGNVVESFEPQDVRRVISEGTSKTARQMLESV
VTNGTGYRAFLPGYRVAGKTGTAQKVANGAYIQGEYIASFIAFAPADNPQLAILCVIDGV
PFYGGSVAAPPVRGVLQDSLKYLGVEMDLKAPLTLGKPRLDMQIPPVKKAATVPSVLGLT
LAEAEKSLRQAGFTVLTEGSGTVVQDQIPHGDSKVEEGSSVLLYLGSEAGAPTSGNWWAV
EEEVDIDIETMLQMPWRQPLSQ
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgagtccttatgtcgtcatgcgcaaacgtatcgcctttctttttttctgtgtcagtgct
tttttggtggtgctgattgtccgactggcctttgtgcaattggctcagggggcgatttta
agcgataaggctgatgaaagccattatcggggagttcctgtagcagccaaaaggggaaat
attgaggatcgcaacggggaggtgctggccatgagtgtcagtaccgagactgtctatgcg
gtgcctgcccaagttcgctcctccggcagagcggaggagatcgcccatgctttgtccggc
ctcttggagatgggaccggagcaggttatggaaagaataaccaagcgatcggctttggaa
tatgtcaagaaaagggtgacggcagaggtggcggctcaagtccgggccttagagctgcct
gggattgggattactgaggatagtgtgcgttattaccccaacagcaccttagctgcacat
attattggctttgcggggattgacaaccaggggttagaaggaatagagttgactagggat
tccgagttgaacggagtcccgggtgccgtattgacagagtttgctgccaatggtatccct
ttgccctttgccaatcaaatgtatgtttccccgaagaatggcaatacggtgcgtctgacc
attgataaaaatattcaggcttttgcggagcgggaactgcagaagctgatgtccggccaa
ggggataatatgaatgggcaggtccccaagagcggcaccatcctggttatggatcccaat
accgggcaggtcttggctcttgcttcggcgcctacctatgatcctaattattacaacaac
tatgatcagagtacccggcgcaatatagcgattcaaaacggctatgaaccaggttccact
tttaagattatcacgttggcggctgcccttgaggaaaagaagatcagtcctcaggaaggt
ttttttgatccgggaggagtgaccatcctgggtaaaaccgttcattgctggaagcgtggg
ggccatggcagccagaccttcactcaggtcgtggaaaactcctgcaacccagggtttgtc
gccatgggccagcgcctgggtatggataaattctataaatacctccatgacttcggtttt
ggtcagaaaacgggaatcgaaatgtccggtgaagctgtaggaattttagccgggaaaaag
agagccactgccttggatcttgccaccatgtcgatcgggcaaaccaataatgtgacggcc
attcagctgcttacggcagtttccgcagtagctaacggcgggaacctgatgaagccccaa
ttggttaaagagatcgtgggaccttcggggaacgtggtggaatcctttgaacctcaggac
gtgcggcgtgtgatcagcgagggtacttcgaaaactgcccggcagatgctggagtctgtg
gtcaccaacggcacgggttaccgggcctttctgcccggataccgggtggcgggcaagacc
gggaccgcccaaaaagttgccaatggggcgtacatacaaggggaatatattgcttccttt
atcgcctttgctccggccgataatccccagctggccatcctttgtgtgatcgatggtgtg
cccttttacgggggatctgtggcggctccgccggtgagaggggtgctgcaggattctttg
aaatacttaggtgtggaaatggatctgaaagcccctctgacgctgggcaaaccccgcttg
gatatgcagatacctccagtgaaaaaagcggcaacggtcccctctgttctcgggctgact
ctggccgaggccgaaaagtctctgcggcaagccggttttaccgtcctgacggagggcagt
ggaacggttgttcaggaccaaattcctcatggggattctaaagtggaagagggatcctcg
gtgctgctctatcttggttccgaggcgggagcacccacttcaggcaactggtgggccgtg
gaagaggaagtggatatcgacatagaaaccatgctgcaaatgccctggcggcagccctta
agccaatga
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