Desulfitobacterium hafniense DCB-2: Dhaf_4127
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Entry
Dhaf_4127 CDS
T00822
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
dhd
Desulfitobacterium hafniense DCB-2
Pathway
dhd02020
Two-component system
dhd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dhd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Dhaf_4127
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Dhaf_4127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dhd03021
]
Dhaf_4127
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
dhd02035
]
Dhaf_4127
Transcription machinery [BR:
dhd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Dhaf_4127
Bacterial motility proteins [BR:
dhd02035
]
Flagellar system
Flagellar assembly proteins
Stator
Dhaf_4127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_23
HTH_28
Clr5
SatD
Motif
Other DBs
NCBI-ProteinID:
ACL22136
UniProt:
B8FTP4
LinkDB
All DBs
Position
complement(4375778..4376524)
Genome browser
AA seq
248 aa
AA seq
DB search
MSNPYEAANRGSWRVEQIEKYLPLVKRISGRLLISLPQHVDEDDLIGYGVFGLLDALERF
DPVRGVKFETYATLRIRGAIIDGLRTMDWVPHSARQKIKRIQDAFAEVEARHGRPASNEE
VAVLLEMEPRDLEAALHQGQMLTLTSLDEVAVGEEGEAYTPRTQLTDPIAQEAFQEVELD
EQKKILADAIEKLPEKEKLVVALYYQEDLTLKEIAVIMKLSESRISQLHSQAILRLRGRL
SRQKKNLF
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatccttatgaagcagccaatcgaggttcatggagagtcgagcaaattgaaaag
tatttgccgttagtcaagcgtatctccggtcggttgcttatttccttacctcaacatgtg
gatgaagacgatttgatcggctacggtgtgtttggattgttggatgccttagagcgtttt
gaccctgttcggggagtgaaatttgaaacttatgctacgctgagaatccggggagcgatt
atcgatggtttgcggacgatggattgggtacctcattcggcacggcagaaaatcaagcgc
atccaggatgcctttgccgaagtggaggcacggcatggccgtcctgccagcaatgaagag
gtagcggttttgctggagatggagccgcgggacttggaagctgccctgcatcaagggcaa
atgctgactttgacctcccttgatgaagtggctgtaggtgaggaaggggaagcctatacc
cccaggacacaattgacggaccccatagcacaggaagcttttcaggaagttgaactggat
gagcaaaaaaagatcctggccgacgctatcgaaaagcttcctgagaaggaaaaactggtc
gtggccttatattatcaggaagaccttaccctgaaagaaatcgctgtgattatgaaactt
tcggaatcaagaatctcccagcttcattcccaagccatcctgcgcctaagaggccgcctc
agccgccaaaagaagaatttattctaa
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integrated database retrieval system
