Desulfitobacterium hafniense DCB-2: Dhaf_4216
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Entry
Dhaf_4216 CDS
T00822
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
dhd
Desulfitobacterium hafniense DCB-2
Pathway
dhd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dhd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Dhaf_4216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dhd03021
]
Dhaf_4216
Transcription machinery [BR:
dhd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Dhaf_4216
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
ACL22223
UniProt:
B8FTY1
LinkDB
All DBs
Position
complement(4460052..4461170)
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AA seq
372 aa
AA seq
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MNDDQLKVDAVKELIQKGKKKGSLTYREIMDTLQGIELTAEQIDEVYEQIGRMGIDIIPE
AGEVEALEKVTDEIPDDVDDPDVEEEVDVDLSIPEGVGIDDPVRMYLKEIGRVPLLTAEE
EIELAKRMEQGDESAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFD
YVKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGREPTP
EEIAVQMDISVERVREIMKIAQEPVSLETPIGEEEDSHLGDFIPDEDAPAPSEAASFILL
KEQLEEVLETLTPREEKVLRLRFGLDDGRTRTLEEVGQEFGVTRERIRQIEAKALRKLRH
PSRSKKLKDYLE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgaccaattgaaggtcgatgcggtaaaagaactgatccaaaaaggcaagaaa
aaaggttctttaacctaccgggagatcatggataccctccaaggaattgagctcacagcc
gaacagattgatgaagtgtatgaacagattggccggatggggattgatatcatccctgaa
gcgggtgaagtggaagccttggaaaaggtcacggacgaaatccccgatgatgtggatgac
cctgatgttgaggaagaggtggatgtggatctttccattcctgaaggagtaggaatcgat
gatcctgtccgcatgtaccttaaagagattggccgcgtcccccttcttactgctgaagaa
gagattgaactggccaaacgcatggaacaaggggacgagagcgctaaacgccgtttggct
gaagccaatttgcgcctcgttgtcagcattgccaaacgttatgtaggccgggggatgctt
ttcctggatttgattcaggaaggcaacctgggactgattaaggctgtagagaaatttgat
tacgtcaaaggctttaagttctcaacctatgccacatggtggattcgccaagccattacc
cgggctattgccgatcaggcaagaaccattcggatacctgtgcatatggtagaaactatc
aataagctgattcgggtatcacgccaacttctgcaggaattaggacgtgaaccaacccca
gaagagatcgctgtacaaatggatatttctgtagagcgggtccgggagattatgaagatt
gcccaggagccggtatccttggagacaccgattggggaagaagaagactcccatttagga
gatttcattcctgatgaagatgccccggccccttcggaggcagcttcctttatcctgttg
aaagagcaattggaagaggtcttagagaccctgactccccgggaagaaaaggttctgcgt
ttgcgttttggccttgatgatggccgtacccggactttagaggaagtaggccaggaattc
ggcgtaacccgggaacggattcgccagatcgaagccaaagctctgcgtaagcttcgccat
cccagccgcagcaagaagctcaaggattacctggaataa
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