Desulfitobacterium hafniense DCB-2: Dhaf_4348
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Entry
Dhaf_4348 CDS
T00822
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
dhd
Desulfitobacterium hafniense DCB-2
Pathway
dhd00550
Peptidoglycan biosynthesis
dhd01100
Metabolic pathways
dhd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
dhd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Dhaf_4348
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Dhaf_4348
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dhd01011
]
Dhaf_4348
Enzymes [BR:
dhd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Dhaf_4348
Peptidoglycan biosynthesis and degradation proteins [BR:
dhd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Dhaf_4348
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Mutator
Motif
Other DBs
NCBI-ProteinID:
ACL22353
UniProt:
B8FVF1
LinkDB
All DBs
Position
complement(4610375..4612468)
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AA seq
697 aa
AA seq
DB search
MEEDKERKPYTRRLWGLSAVVFLVFLILGFNLWRLQIAKASYYETKAQGNIMKLVSIPSN
RGDIVDRNGELLVTSVPQFALTIDWMDLQTAPVDSVQEVVARLAGYIKPYWPIKEQSVEN
ITEDILVMMQNQQWERYRSVTVMGDVPDPLKAIIAEHKDELPGINIEALPVRDYRKGTLA
GHLLGYVREVGSEEEIASFNKNPQAQEDGFKYTQGDQVGKMGVEKGYDYWLRGREGVQQV
IVDNSARPIAKEVIQPSEPGKTLQLTLDAKLQAVVEKTLDDVFREYVHPQHPDSNQGAAV
VIEVKTGKILAMTSHPYMDPNDLTGIISEELAEKYFQAKDAASYNRALSGTYAPGSTFKM
ITAMAGLHAGVVTPYEQFNSSNVAATLGTIHGIQEWSWGGFGLVDLNRAMAKSSNTYFQA
VGQRVFNKNGELIKQIANEFGLGVYTGVDIPGESKGSAPSPEWKKATFGPQYEKARDNAL
AKIEEEYKAKLGSAKDEAERKKLESQKKSKINQVEADYAYNVRWFVDWQYSETFNTSIGQ
GDNVYTPLQLANYVATIVNGGKRMQPYVVDKILDPVTGETVYQNEPIVRNTVSVSPEILQ
TVKEAMSKVTIGEGTASGIFADVPEFSGGAKTGTAQIGSKGTAAGELFNGVFVAFAPYDD
PQIAFAGVVEYGGHGGETAGAVAKAAFMEYFGWESNK
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagataaagaacgcaaaccctatacacgccgtctctggggccttagcgccgtc
gtgtttctcgtattcctgattcttggcttcaacctttggcgattacaaatcgccaaagct
tcctattacgagacaaaggcccagggtaatatcatgaaactggtctccatcccttccaac
cgtggagacattgtcgatcgcaatggtgaattgctggttaccagtgtgcctcagttcgct
ctgactattgattggatggatctgcaaacggctcccgtcgatagtgtgcaggaagtcgtt
gcccgcctggcgggctacattaaaccctattggccgattaaagagcaaagtgtggagaat
atcacagaggatattctggtcatgatgcaaaatcagcagtgggagcgttatcgatcggtt
acggttatgggtgatgtgccggatcctctcaaggctattattgcggagcataaggatgaa
cttccgggtattaacatcgaagcattgcctgtacgtgattatcgcaagggtaccttagcc
ggtcatcttttgggatatgtccgtgaagtaggcagtgaggaggaaattgcttcgtttaat
aaaaatcctcaagcccaggaggatgggtttaaatacacccaaggggatcaggtaggaaaa
atgggcgtggaaaaaggctacgattactggctgcgcggcagagaaggggttcagcaggtc
atcgtggataatagtgcccgccccattgccaaagaagtcattcagccctccgagcccggg
aaaactctgcaactgacccttgatgccaagctgcaggctgtggtggagaagaccttggat
gatgtgttcagggagtatgtacatcctcagcatcccgactccaatcagggtgccgcagta
gtcatagaggttaagacgggaaagatcctggcgatgacttcccatccctatatggatcct
aatgatctcactgggattatctctgaggaacttgccgagaagtatttccaagcgaaagat
gcagcctcctataatcgggcattatccggaacctatgccccgggctcaacctttaaaatg
attacagctatggccggtttgcatgccggcgtggtgactccttatgagcagtttaacagc
tccaatgtggcggctactttgggaacgatccatggtattcaggagtggtcttggggaggg
ttcggattagtggatctgaatcgggccatggctaagtcttccaatacctatttccaagcg
gtggggcaaagagtctttaataaaaacggagagctgataaagcagattgccaatgaattt
ggtctcggtgtctatacgggtgtggatattcccggtgagtccaaaggaagtgctccttca
ccggaatggaaaaaggcaactttcgggccccaatatgaaaaagccagggataatgccctt
gccaaaatcgaagaggagtataaggccaagcttgggtcggctaaggatgaggccgagcgg
aagaaattagaaagccagaagaagagcaagatcaatcaagtggaagcggattacgcctat
aatgttcgttggtttgtcgattggcagtattccgagacctttaatacctcgatcggacaa
ggggataatgtctatacgccattgcagcttgctaattatgtggcgaccattgtcaacggc
ggtaagagaatgcagccctatgtggtggacaagatcctggatcctgtgacaggtgaaaca
gtgtatcagaacgaacctatagtcagaaacaccgtctcggtttccccggaaatattgcag
acagttaaagaggctatgagcaaagttaccatcggtgaaggaacggcaagcggaattttt
gctgatgttccggagttcagcggcggggccaagactgggacggctcagatcggttccaaa
ggtacagcagccggggagctctttaatggggtctttgtggcctttgcaccttatgatgat
ccgcaaatagcttttgccggagttgtcgaatacggaggccatggcggtgaaactgccggt
gctgtagctaaagctgcttttatggagtattttggctgggaatctaacaaatga
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