Drosophila hydei: 111592543
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Entry
111592543 CDS
T05888
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
dhe
Drosophila hydei
Pathway
dhe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111592543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dhe03019
]
111592543
Messenger RNA biogenesis [BR:
dhe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111592543
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
111592543
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
111592543
NCBI-ProteinID:
XP_023160593
UniProt:
A0A6J1LBF0
LinkDB
All DBs
Position
Unknown
AA seq
214 aa
AA seq
DB search
MAEKAKNTDASYQNADDMLICLPGDRLCRQEDNIIVGQGTYEQGGYIYASKSGIINIDES
SEKCQIVSVHKPGFHLTIPATGDVVTARVLVTTPKFAKCAIFCVRNVLVESSYRGLLRKE
DVRETDKDRVDIYKSFKPGDVILARVVNQMEQSFMLSTAEAELGVVVAYASDFRKYRIPM
VPIGWSEMQCPQTTIKEPRKVAKVLPESSIMPDK
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaaggccaagaacacagatgcttcctatcagaatgcggatgacatgctgata
tgcctgcctggagaccgtttgtgtcgccaggaggataatatcattgtaggtcaaggtacc
tatgagcaaggcggctacatttatgccagtaaatcaggaattatcaacattgatgaatca
agtgaaaaatgccaaattgttagtgtacacaagcctggctttcatctgacaataccggca
acaggagatgtcgtcacagctcgcgttctagtgacaacaccaaaattcgcaaagtgtgcg
atattttgcgttaggaacgtgttagtggagagcagctaccgcggtctgctgcgaaaggag
gatgtccgcgaaacagataaagaccgtgtagatatttataaatcatttaaacccggcgat
gtcatattggcgcgcgttgtcaaccaaatggagcaatcctttatgttaagcacagctgaa
gcagaactcggtgtggtggttgcatatgccagcgattttcgaaaatatcgaattcctatg
gtgcccattggttggagcgaaatgcaatgtccgcaaacgacgattaaggaaccaagaaag
gtggcaaaagtattgcccgaaagttcaattatgcctgacaaataa
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