Drosophila hydei: 111593245
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Entry
111593245 CDS
T05888
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
dhe
Drosophila hydei
Pathway
dhe03020
RNA polymerase
dhe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dhe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111593245
09124 Replication and repair
03420 Nucleotide excision repair
111593245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dhe03021
]
111593245
03400 DNA repair and recombination proteins [BR:
dhe03400
]
111593245
Enzymes [BR:
dhe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111593245
Transcription machinery [BR:
dhe03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
111593245
DNA repair and recombination proteins [BR:
dhe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
111593245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
111593245
NCBI-ProteinID:
XP_023161667
UniProt:
A0A6J1L5A9
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MMYDNEEENFDEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIV
EDSPAIELQAEAQHTSGEVETPPRFSLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNLT
YSAPLYVDITKTKNVEGMDPVETQHQKTFIGKIPIMLRSTYCLLSQLTDRDLTELNECPL
DPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAFKTEIRSCLEHSSRPTSTLWVNM
MARGSQNIKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMME
MVKPSLDEAFVVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCET
KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYT
QKFIDRGKDFNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTL
SHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPS
PILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVS
EVSMIRDIRDREIRIYTDAGRICRPLLIVENGTLLLKKTHVEMLKERDYNNYSWQVLVAS
GVVEYIDTLEEETVMIAMSPYDLKQDKDYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQ
SPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPMKPLVTTRSMEYLRFRELPAGINS
IVAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDAENKRVGDQEENFEKPHRGTCQ
GMRNAHYDKLDDDGIIAPGIRVSGDDVVIGKTITLPENDDELDSNTKRFAKRDASTFLRN
SETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTC
EGLAPDIIINPHAIPSRMTIGHLIECLQGKLGSNKGEIGDATPFNDAVNVQKISTFLQEY
GYHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGR
ARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECK
GCKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgataatgaagaagagaattttgatgaggaaaatgcagaggaaatctcgcac
gagctgtggcaggaagcctgctggattgttatcaacgcttacttcgacgaaaagggcctt
gtgcgtcagcagctggacagcttcgatgagtttatacaaatgtctgtgcagcgcattgtc
gaggactcaccggccattgagctgcaggcggaggcccagcacacatccggcgaagtagag
acacctcctcgattctctctcaaattcgagcagatttatttatccaagccgacgcattgg
gaaaaggatggctcacccagtcccatgatgcctaacgaggcacgcttgcgcaatctgacc
tactcagctccactttatgtggatattacaaagacaaagaatgttgagggcatggatccc
gtggaaacacagcatcagaaaacgttcattggtaaaattcccataatgttgagatcaaca
tactgtctgctctcgcagctcaccgatcgtgatttgaccgagttaaacgagtgtccgctg
gatccgggtggctacttcattattaacggatcagagaaagtgcttatcgctcaggagaag
atggccacgaatacagtgtatgtattcagcatgaaagatggcaaatacgcattcaaaacg
gagatacgctcctgcctggagcacagctcgcgtcccacctccacgctctgggtgaacatg
atggctcgtggctcgcaaaacattaagaaatctgcgattggacagcgtataatcgccata
cttccatacattaaacaagagatacccataatgatagtgtttcgtgccttgggctttgtg
gctgatcgtgatatcttggagcacattatatacgactttgacgatccagagatgatggag
atggtgaagccctcactggacgaggcgtttgtggttcaggagcagaatgtcgcccttaat
ttcattggtgctcgcggcgcacgtcccggcgtcaccaaggataagcgtattaagtacgcc
aaggaaattctacaaaaggaaatgctgccgcatgtcggtgtctctgacttttgcgagaca
aagaaggcgtatttcctaggctacatggtacatcgcttgctgctggcctcgctgggtcgt
cgtgagctcgacgatcgtgatcattatggcaacaagcgcctggatcttgctggtccgctt
ttggccttcctattccgcggcctctttaaaaacttaatgaaagaagtgcgcatgtataca
caaaagttcattgaccgcggcaaagatttcaatttggagcttgctatcaaaacaaacatt
attacagacggtctgcgctactcgctggccacaggcaactggggcgatcagaagaaggcg
catcaggctcgtgccggcgtctcgcaggtgttgaatcgcctcacatttgcctccacattg
tctcatttgcgtcgcgtcaactcgcctattggacgcgatggcaaactggctaagccacgt
cagttgcacaacacactttggggcatgttgtgcccggcagagactcctgagggcgcagct
gtggggttggtaaagaatttggctttgatggcctatatttctgtgggctcacagccgtcg
ccaattcttgagttcttggaagagtggtccatggagaatctagaggaaattgccccctct
gcgattgcagatgctaccaaaatcttcgtgaatggttgttgggtgggcatacatagagat
ccggagcagctgatggctacacttcgtaagctacgtcgtcagatggatattattgtatcg
gaggtgtccatgattcgtgacattcgtgaccgcgagatcagaatctacacagacgcgggc
cgtatatgtagaccattgctcattgtggagaatggtacgttgctgttgaagaagactcac
gtggagatgttgaaggagcgagactacaacaactacagctggcaggtgctggttgcttct
ggtgtcgttgaatacattgatacgctcgaagaggaaacggtcatgattgccatgtcgccc
tacgatctcaaacaggacaaagactacgcctattgtaccacctacacccactgcgagatt
catccggccatgatactgggcgtctgtgcctcaattataccttttcccgatcacaatcag
agtccacgtaacacctatcaaagcgctatgggtaagcaggctatgggtgtttatataacc
aatttccacgttcgtatggacactttggcgcacgtactgtattatcccatgaaaccactg
gttaccacgcgatccatggagtatttgcgtttccgtgagctgcctgcgggtattaactcg
attgtggctattttgtgctacactggctacaaccaggaggattctgttattctaaacgcg
tctgctgtggagcgtggcttcttccgttcggtgttttatcggtcgtacaaagatgcggag
aataaacgtgtcggtgatcaggaggagaactttgagaaaccgcatcgtggcacctgccag
ggtatgcgaaacgctcattatgacaaactggacgatgatggcatcattgcacctggcata
cgtgtctccggagacgatgtcgttattggcaagacaataacgctgcccgaaaacgatgat
gagctggacagcaatacgaagcgattcgccaagcgtgatgcttctactttcttgcgtaac
tctgagacgggtatagtggatcaggttatgttgacattaaacagcgaaggctacaagttc
tgcaagattcgtgtgaggtccgtgcgcataccacaaattggcgacaaatttgcctctcgt
cacgggcagaagggtacttgcggtatacagtatcgacaggaggacatgccgttcacttgc
gaaggattagcgccagatattatcattaatccccatgctattccctcacgtatgacaatt
ggtcatttaatcgagtgtctgcaaggaaagctgggctccaataagggcgagatcggcgat
gccacgcccttcaatgatgccgtcaacgtacagaagatttctactttcctgcaggagtat
ggatatcacctgcgtggcaatgaggtcatgtacaatggccacaccggacgcaaaattaac
gctcaggtgttcctgggccccacctactatcagcgcctcaagcatatggtggacgacaaa
atccattcacgtgcgcgtggtccagtgcagatccttgtgcgtcagcccatggagggcaga
gcacgtgacggcggcttgcgttttggtgagatggagcgcgattgtcaaatctctcacggc
gctgctcagttccttcgcgaacgtctgttcgaagtgtccgatccgtatcgcgtgcatatt
tgcaacttttgtggtctgattgccatcgccaatctgcgcaacaatacgttcgagtgcaaa
ggctgcaagaacaagacgcaaatctcgcaagtgcgtctgccgtacgcggccaagctgctc
ttccaggagctcatgtccatgaacatagccccacgtctgatggttagctga
DBGET
integrated database retrieval system
