KEGG   Drosophila hydei: 111593328
Entry
111593328         CDS       T05888                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
dhe  Drosophila hydei
Pathway
dhe03030  DNA replication
dhe03410  Base excision repair
dhe03420  Nucleotide excision repair
dhe03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dhe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111593328
   03410 Base excision repair
    111593328
   03420 Nucleotide excision repair
    111593328
   03430 Mismatch repair
    111593328
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dhe03032]
    111593328
   03036 Chromosome and associated proteins [BR:dhe03036]
    111593328
   03400 DNA repair and recombination proteins [BR:dhe03400]
    111593328
DNA replication proteins [BR:dhe03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    111593328
  DNA Replication Termination Factors
   ELG1-RFC complex
    111593328
Chromosome and associated proteins [BR:dhe03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    111593328
DNA repair and recombination proteins [BR:dhe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     111593328
  Check point factors
   HRAD17(Rad24)-RFC complex
    111593328
SSDB
Motif
Pfam: AAA Rep_fac_C RCF1-5-like_lid AAA_lid_RFC1 DNA_pol3_delta2 AAA_16 AAA_assoc_2 Mg_chelatase AAA_22 SLFN-g3_helicase AAA_11 AAA_24 DUF815 Rad17 Gp44_lid AAA_5 AAA_30 DNAX_ATPase_lid RuvB_N AAA_14 AAA_19 bpMoxR Penaeidin nSTAND_NTPase5 AAA_7 ResIII AAA_3 AAA_28 AAA_25
Other DBs
NCBI-GeneID: 111593328
NCBI-ProteinID: XP_023161804
UniProt: A0A6J1L5M5
LinkDB
Position
Unknown
AA seq 354 aa
MQAFLKTGKSSISTTDKQATNAPIERRKPPAPWVEKYRPRSVDDVVEQSEVVAVLRKCVE
GADLPNMLLYGPPGTGKTSTILAAARQIFGDMYRERILELNASDERGINVVRTKIKNFAQ
LTASSVRPDGRPCPPFKIIVLDEADSMTHAAQAALRRTMEKESRSTRFCLICNYVSRIIV
PITSRCSKFRFKALGETQIITRLQHICLQENVSIDPDAYKSIVKISGGDMRRAITTLQSC
YRLKGSEHTINTDDLLEMSGIIPEHFLEDYLEVCRSGKYERLEHFVREIGYSAYSIGQMM
DQFVEFIVRCGSLTDKQKAIICDKLGECCYRLQDGGSEYLQIMDLGCTIILALK
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgcaggcgtttttaaaaactggcaaatccagcatcagtactacagataaacaagcaacc
aatgcgcctattgaacgccgcaagcctcctgcgccctgggtggaaaaataccgcccaaga
agcgttgatgatgtagtggagcaatcagaggtggtggccgtactgcgcaaatgtgtagag
ggtgccgatttgcccaacatgctgctctacggcccgcctggcactggcaaaacgagcacg
attcttgcagcggctcgtcaaatatttggcgatatgtaccgagagcgcatactggagctg
aatgcctccgatgagcgcggcatcaatgtggtacgcaccaagatcaagaactttgcacag
cttacagcgagcagcgtgcgtcccgatggtcgtccgtgtccgcccttcaagatcattgtg
cttgacgaagcagattctatgacgcatgcggcacaagcggcattgcgtcgcactatggaa
aaggagagtcgcagtactcgtttctgtctcatctgcaactatgtatcgcgcatcattgtg
cctattacgtcgcgttgctccaagtttcggttcaaagctctgggtgaaacacagatcatt
acgcgactgcagcacatttgcttgcaggagaatgtgagcattgatccagatgcttacaaa
tccattgtgaaaatatctggcggcgatatgagacgtgctataaccactctgcagtcttgc
tatcgcctcaaaggctccgagcacaccatcaacacagacgatcttctcgagatgtcaggc
attataccagagcattttctggaagactacctggaggtctgtcgatcgggaaaatatgag
cgtttggagcattttgtacgtgagattggttactcggcttatagcattggccaaatgatg
gaccagttcgtggaatttattgtgcgctgcggctcgctaactgacaaacagaaagccatc
atatgcgataagctgggcgaatgctgctatcgtctacaggatggcggctctgaatatttg
caaatcatggatcttggctgtaccatcattctggctcttaaataa

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