Drosophila hydei: 111595124
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Entry
111595124 CDS
T05888
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
dhe
Drosophila hydei
Pathway
dhe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111595124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dhe03400
]
111595124
DNA repair and recombination proteins [BR:
dhe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
111595124
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_22
Motif
Other DBs
NCBI-GeneID:
111595124
NCBI-ProteinID:
XP_023164464
UniProt:
A0A6J1LLX1
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MSKKLNTSAGGTPKNTLFNYFAKSPVVDKKKLTPSNGGELQKENLQNRNLKGVNKEIKPA
ARRKLPEATGDSDPEEEIGKRKRKRIVLPESESEEEYESKSEPDFSDDGSDYQPDAKEAT
FSEESASGEEEVDISDPDTEDDPTPKKNSKKSTKNFINNNNNEEPASKKVKMETPVLVTG
GTFMEKLQQLQSNAKKDAAYDEIVTTTSNLDEPVVWPHQKLDFLQPDKIKDKAGRRPDHP
DYDKSTLHVPEKFLNSLSPGVRQWWVLKSDNFDCVLFFKVGKFYELYHGDADVGVNELGF
TYMRGEFAHSGFPEISFDKMSSILIDRGYKIARVEQTETPDMMTERCKRIKATKFDKVVA
REICQITDRGTQVFGSQCAIGPNHQPNYMLAIVEQDAGSSSKYGICFIDTSIGDFHVGEF
DDDKSCSRLLTLISHNMPVLLLHEKAALSSRTQQILRTVLGGILKEQLPGAGSQLCSAEK
TLKLLAERYYAGTGQEDNWPLVLRTMQSDTDHLGLTPAEPYKLALKALGQCIHYIAKCKL
EPKVLPMARYQLYVPPDQQQDEITKPKVTATALQRSHMVLDATTLSNLRIVGEEHSLLST
LDQCCTKFGKRLLHHWLCAPSCDLTVLRERQEAIGELLRQPDELQQLRALLAPMPDFERH
LAQIHLFGNKYIGQTEHPDSRAILFEEKLYNKQKLRSFMSILKGFETLMQLPAMFRQCEA
KLLQRLTQLPSNGGNYPDLSKQLKFFENAFDHEAAAKDGVVAPQPGMDSDYDEVLQRIAE
VEKRLKAYLIEQERHFGCRVIYFGSDKKRYQLEVPETHAHKATKSYALEGQVKGKKPARR
YTTTETKALLKDMQQAEDARNTLLKDLARRLFEKFSIHYEQWKQCIDCVATLDVLAGLAE
YARQQLVICVPELVSAQSQPFIELEEGYHPCANPSTYIPNGLQLGTESEAPLSLLTGPNM
GGKSTLMRQLGLLVVMAQIGAHIPAASCRLSLVDRIFTRLGAQDDILAGHSTFLVELNET
SLILKHATSNSLVLLDELGRGTATYDGTAIAASVVNFLANLKCRTLFSTHYHNLIDFFHM
DKRITLGHMACMVENEDNTDPTQETVTFLYKYTAGACPKSYGFNAAKLAGMPHGIIKRAY
ELSKKVEAIALQRKIAAKIVTATALGDKMDNTKKEKLKNLKDLLTQLKLCQV
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaaattaaatactagtgcaggtggcacgcccaagaatacgctgttcaactac
tttgccaaatcgccagttgttgacaaaaagaaactaacgccaagcaatggaggggaactc
caaaaggagaatctgcagaacaggaatctcaagggtgtgaataaggaaatcaaaccagct
gctagacgcaagttgccagaagctacaggagacagtgatcctgaagaggagattggtaaa
cgtaaacgaaagcgcattgtattacccgaatcagagagcgaagaggaatacgaatccaaa
tcggaaccagacttttccgatgatggctcagactatcaaccagatgcaaaggaggctacc
ttcagcgaagagagcgccagcggcgaagaagaagttgacattagcgatcctgacactgaa
gacgacccaacacccaagaagaacagcaaaaagtccacgaaaaactttataaacaacaat
aataatgaagaacctgctagcaagaaggtgaagatggagacacccgtcttagtgacaggt
ggcacgtttatggagaagctgcagcagctgcaaagtaatgctaaaaaggatgctgcttac
gatgagattgtgaccaccacatcgaatctggatgagcctgttgtttggccacatcagaag
ctggacttcttgcagccggataagattaaggacaaggcaggcaggcgaccagatcatccc
gattacgacaagagcacgctgcatgtgcccgagaagttcctcaattccttgtcgccgggc
gtgcgccaatggtgggtactcaaatcagacaactttgattgcgtgctctttttcaaagtg
ggcaagttttatgagctgtatcacggcgatgccgatgtgggtgtcaatgagttgggcttc
acctacatgcgcggagaatttgcacactccggattcccagaaatctcctttgataagatg
tcctccatactcatagacaggggctataagatcgcccgtgtggagcaaaccgaaacaccg
gacatgatgacggagcgttgcaaacgcatcaaggccacaaaattcgataaggtcgtggct
cgtgagatctgtcagatcacagatcgtggcactcaggtgtttggctcgcagtgcgccatt
ggtcccaatcatcagcccaactatatgttagccatagtagagcaggatgcgggctccagc
agcaaatatggcatttgcttcatagacacctccattggtgatttccatgtgggtgaattt
gatgatgacaaaagctgctctcgcctattgacactaatctcccacaacatgcccgtgctg
ttactccatgagaaggcagctcttagctctcgcactcaacaaatactacgcactgttctg
ggtggcatacttaaggagcagctacctggagctggcagccaactatgtagcgctgagaag
acactgaagctgctagcggagcgctattatgctggcactggccaagaggacaactggccg
ctggtgttgcgcacaatgcagtcggacacagaccacttgggtctcacgcctgcagagccc
tataagctggcactcaaagctctaggtcaatgcatacactacatagccaaatgtaagctg
gagcccaaggtgctgcccatggcgcgctatcagttgtatgtgccgcctgatcaacagcag
gatgagattaccaagccaaaagtgactgctacagcgctgcagcgctcgcacatggttttg
gatgcaacgaccttgtccaatttgcgcattgttggcgaggagcattcattgctgtcgacg
ctagatcagtgctgcaccaagtttgggaaacggctgctgcatcattggctgtgtgcgccc
agctgtgatttgactgtgctacgcgaacgacaggaggcgattggggagctgctacgacag
cctgatgaactgcagcagttgcgcgccttgctggcgcctatgcccgacttcgagcgtcat
ttggctcagattcatttatttggcaacaaatacataggccaaacggagcatccagacagc
agggccatacttttcgaggagaagctctacaataaacagaagctgcgcagtttcatgagc
atactcaaaggttttgagacattgatgcaattgccagcgatgttccgacaatgtgaagcg
aagctactgcagcgtttgactcagcttccatccaatggaggcaactatcccgatctcagc
aagcagctgaagttctttgagaatgccttcgaccacgaggcagctgccaaagacggcgtc
gttgcacctcagcctggcatggactcagactacgatgaggtgctgcagcgcatagcagag
gttgagaaacgtctgaaggcctatctgattgagcaagagcgtcactttggctgccgcgta
atttattttggctccgacaagaaacgctatcagctggaggtgcccgaaacgcatgcccac
aaggccaccaagtcgtatgcgctggaggggcaggtgaagggcaaaaagcctgctcgtcgc
tacaccacaacggagacaaaggcgctgctgaaggatatgcagcaggcagaggacgctcgg
aacactctgcttaaggacttggcgcgtcgcctcttcgaaaagttctccattcactatgaa
cagtggaagcagtgcatcgactgtgtggccacattagatgtgctcgccggcctcgctgaa
tatgcgcgtcagcaactggtcatctgtgtgccggagctggtctcggcgcaatcccagcca
tttattgaactggaggagggctatcatccgtgcgcaaatccatctacttacatacccaat
ggcctgcagctgggcaccgaatcggaggctcccttatcgctactcactggccccaatatg
ggcggcaagagcacattgatgcgacagctcggcttgctggtcgtcatggcacaaattggt
gcccacattcctgctgccagctgtcgactctcgcttgtggatcgcattttcactaggctg
ggcgctcaggatgatatactggctggtcacagcaccttcctggtggagctaaatgaaacc
tcgcttatactaaagcatgccacttcgaattccttagtgttgctcgatgagttgggacgc
ggcactgccacatatgatggcaccgccattgctgcatctgttgtcaactttttggctaac
ctgaagtgccgcactttgttctccacgcactaccacaatctgattgacttcttccacatg
gataagcgcattaccttgggccatatggcgtgcatggttgagaatgaggacaatacagat
cccacccaggagacggtcacctttctgtacaaatacacagcaggcgcctgtcccaaatcg
tacggcttcaatgcagccaagttggcgggcatgccacatggcataattaaacgtgcttac
gagctatctaaaaaagtcgaagctattgcactgcagcgcaaaattgcagcgaaaattgtg
acagcaactgcgcttggagataagatggataacacaaagaaagaaaaactgaagaatttg
aaagatttgctaacgcagcttaaactgtgccaagtgtga
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