Drosophila hydei: 111595345
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Entry
111595345 CDS
T05888
Name
(RefSeq) putative U5 small nuclear ribonucleoprotein 200 kDa helicase
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
dhe
Drosophila hydei
Pathway
dhe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111595345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dhe03041
]
111595345
Enzymes [BR:
dhe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111595345
Spliceosome [BR:
dhe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
111595345
Complex C
U5 SnRNP specific factors
111595345
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
SNRNP200_wHTH
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_30
AAA_22
AAA_11
Motif
Other DBs
NCBI-GeneID:
111595345
NCBI-ProteinID:
XP_023164787
UniProt:
A0A6J1LGN0
LinkDB
All DBs
Position
Unknown
AA seq
2142 aa
AA seq
DB search
MADAAARQLQYEYKANSNLVLQADVRLIERPRRDEATGEVCSLVGKLDGTRMGDRYQRTK
PEKTEERKVKRQKRDEAQYDFERMKGATLLSEGIDEMVGIVYRPKTQETRQTYEVLLSFI
QEALGDQPRDILCGAADEILAVLKNERLKDRERKRDVDSLLGEVTDERFALLVNLGKKIT
DFGSDAVNALTAATNNDEQIDDTYGINVQFEESEEESDNDMYGEIRDDDVQDEGEEARID
HTLHAENLANEEAASNVKKDRLLHPLDIDAYWLQRCLSKYYKDAMVSQSKAADVLKILKD
AADERDCENQLVLLLGYDCFDFIKQLKLNRQMILYCTMLASAQTDSERQRIREKMRGNTA
LAKILRQLDTGKADEQEEADARANKRGKGDADDGGAAAAGQVAGVRQLLELDELAFTQGS
HFMANKRCQLPDGSYRKQRKGYEEVHVPALKQVAFEADEELQPIDKLPKYVQPVFDGFKT
LNRIQSRLYKAALDSDENMLLCAPTGAGKTNVALLTMMREIGKHINEDGTINAQDFKIIY
VAPMKSLVQEMVGNFGRRLACYNLTVSELTGDHQLTREQIAATQVIVCTPEKWDIITRKG
GERTFVSLVRLVIIDEIHLLHDERGPVLEALVARTIRNIETTQEDVRLVGLSATLPNYQD
VATFLRVKPDKGLFYFDNSYRPVALEQQYIGVTEKKALKRFQVMNEIVYEKTMEHAGRNQ
VLVFVHSRKETGKTARAVRDMCLEQDTLGSFLREGSASMEVLRTEAEQVKNTELKELLPY
GFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGR
WVELSALDVLQMLGRAGRPQYDTKGEGILITNHSELQFYLSLLNQQLPIESQFVSKLPDM
LNAEIVLGTVQHLQDAVNWLGYTYLYIRMLRNPTLYGVSHDAIKADPLLEQHRADLLHTA
ACCLERSGLIKYERKTGHFQVTDLGRIASHYYLTHETMLTYNQLLKQTLSEIELFRVFSL
SSEFRHISVREEEKLELQKLMERVPIPIKESIEEHSAKVNVLLQAYISQLKLEGFALMSD
MVFITQSAARLMRAIFEIVLTRGWAQLADKTLTLCKMIDRRMWQSMTPLRQFKKMPDEIA
KKLEKKHFPWSRLYDLEPHELGELIRVPKLGKTIHKFVHQFPKLELSTHIQPITRATLRV
ELTITPDFQWDEKVHGQSEGFWVLIEDVDSELILHHEFFLLKQKYAQDEHQLKFFVPVFE
PLPPQYFLRIVSDRWIGAETQLPVSFRHLILPEKNMPPTELLDLQPLPISALRQPKFEAF
YSQRFPQFNPIQTQVFNAVYNSDENVFVGAPTGSGKMTVAEFAIMRLFSQSSEGRCVYLV
SQEALADLVFADWHNKFGGLDIKVVKLTGETGTDLKLIAKGQLVITTADKWDVLSRRWKQ
RKNVQQINLFIVDELQLVGGEEGPVMEIVCSRMRYISSQIEKQIRIVALSASLTDARDVA
QWLGCNPNATFNFHPSVRPIPLELHIQGFNVTHNATRIATMSKPVYNAILKYSPHKPVIV
FVSSRKQARLTAIDILTYAASDLQPNRFFHAEEDDIQPFLERMSDKTLKETLAQGVAYLH
EGLSASDHRLVEQLFDSGAVQLAVVSRDLCWGMSISAHLVIVMDTQFYNGKNHSYEDYPI
TDVLQMIGRANRPNEDADAKCVLMCQSSKKDFFKKFINEPLPIESHLDHRMHDHFNAEVV
TKTIENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVTHRHLSDHLSELVENTLSDLEQSKC
ISVEDDMDTLPLNLGMIAAYYYINYTTIELFSLSLNSKTKVRGLLEIISSAAEYEDVVVR
HHEEQVLRTLSQRLPNKLTGPNETAPKFNDPHIKTNLLLQAHLSRLQLGPELQGDTEQIL
SKAIRLIQACVDVLSSNGWLSPAVAAMELAQMVTQAMWSKDSYLRQLPHFNADIIKRCTE
KKIETVFDIMELEDEDRTRLLQLSDVQMADVARFCNRYPNIELNYEVVDKDRINSGSTVN
VVVQLEREDDVTGPVIAPFFPQKREEGWWVVIGDPKTNSLLSIKRLTLQQKAKVKLDFVA
PSPGKHDYTLYYMSDSYLGCDQEYKFSIEVGDFQSESESESD
NT seq
6429 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgccgcagcacgtcaattgcagtacgagtacaaggcgaattcgaatcttgtg
ctgcaagctgatgtacgtctaatcgagcgtccgcgtcgagatgaagccactggcgaggtg
tgctctttggttggcaaattagatggcactcgcatgggtgatcgctatcagcgtacaaag
ccggaaaaaacggaggagcgcaaagtaaagcgccaaaaacgtgatgaggcacagtatgat
tttgagcgcatgaagggcgccacattgctatcggagggtattgatgagatggtaggcatt
gtctatcgacctaagacgcaggagacccgtcagacctacgaagtgctactgagtttcata
caggaggcattgggtgatcagccacgcgatattttgtgcggtgctgcagatgaaattttg
gctgtgcttaagaatgagcgactgaaagaccgcgaacgcaaacgagacgtagacagcttg
cttggtgaagtgactgatgaacgtttcgcattgctcgttaatcttggcaagaaaatcacc
gacttcggcagtgatgcagtaaatgctctaacagcagctaccaacaatgatgaacagata
gatgatacttacggcatcaacgtacaattcgaggagtccgaagaggagagtgacaatgac
atgtatggcgagatacgcgatgatgacgtacaagatgaaggcgaagaagcgcgcattgat
cacaccctgcatgccgaaaatctagctaacgaagaggcggctagtaatgtaaaaaaggat
cgcttgctacatccgctcgatattgatgcctactggctgcagcgctgtctcagcaagtac
tacaaggatgcgatggtctcacagagtaaggccgctgatgttctcaagatactaaaagat
gccgccgacgaacgcgactgtgagaatcagttggttttgctgctgggctacgattgcttt
gacttcattaagcaactgaaactaaatcgccagatgatactttattgtaccatgctagct
tctgcacaaaccgatagcgaaaggcagcgtattcgtgaaaagatgcgaggcaatacggcg
ctagccaaaatcctacgtcaactcgacactggcaaggccgatgagcaggaggaggcggat
gcgcgagccaacaaacgtggcaaaggcgatgccgacgatggcggcgccgcggctgctggt
caagttgctggtgtacgacaactgttggaattggatgagctagcctttacccagggctcg
catttcatggccaacaagcgttgccagttacccgatggcagctatcgcaaacagcgtaaa
ggctatgaggaggtacatgtgcctgctctaaagcaagtagcattcgaggcagacgaggag
ctgcagccgattgacaaactgcccaagtatgtgcagccagtgttcgatggctttaagact
ttgaatcgcattcagagccggctctataaagcagctttggatagcgatgaaaatatgctg
ctttgtgcgccaacaggtgctggtaaaacgaatgtagccctgctcacgatgatgcgggag
attggcaagcacataaatgaggatggcaccatcaatgcacaagatttcaagatcatctat
gtggcacccatgaaatcactggtacaggaaatggtaggaaacttcggacgtcgccttgcc
tgctacaatcttactgtctctgaattgacgggtgatcatcagcttacgcgtgagcaaatt
gctgcaacacaggtgattgtctgcacgccagagaagtgggatattattacacgaaaaggt
ggggaacgcacatttgtgagtctggtgcgtttggtcatcattgatgagatccatttgttg
cacgacgagcgtggaccggtgcttgaggcattggtggcacgtaccatacgcaacattgag
accacgcaggaggatgtgcgtttggttggcctgtctgccacgctgccaaactaccaggat
gtggctacatttctgcgtgtgaagcccgacaagggtctcttctactttgacaacagctat
cgacccgtagctctcgaacaacagtacattggtgtgaccgagaagaaggcattgaagcgt
ttccaggtcatgaacgagatagtgtatgagaagacaatggagcatgctggtcgcaatcaa
gtgctcgtctttgtgcactcacgcaaagagacaggcaaaacggcgcgtgcagtgcgtgac
atgtgcctcgaacaggacacgcttggcagctttttacgcgagggatcggccagcatggaa
gtgttgcgtaccgaggcggagcaggtgaagaatacagagctaaaggaattgctgccctat
ggatttgccatacatcatgctggcatgacgcgcgtggatcgtacgctagttgaagatctc
tttgctgataggcatattcaagtgctggtgtcgacagctaccttggcctggggtgtcaat
ttgcccgcgcacacggttatcatcaaaggcacacaagtgtacaatccggagaagggccgt
tgggtcgagctgagcgccttggatgtgctgcagatgttgggccgtgcaggtcgtccacag
tatgataccaagggcgagggcatacttattacgaatcacagtgagctgcagttttatctc
tcgctgctcaatcagcagcttcccattgaatcgcagttcgtttccaagctgccggacatg
ttgaacgctgagattgtgctcggcaccgtgcaacatctacaggatgcagtcaattggctg
ggttatacttacctctacatacgcatgctacgtaatcccaccttgtatggcgtttcgcac
gatgcgattaaagcagatccgcttctggagcagcatcgcgcagatttgctgcatacagct
gcctgttgcctggaacgcagtggcttaatcaaatacgagcgcaagacgggacacttccag
gtcaccgatctcggccgcattgcatctcactactatctgacccacgagacaatgctgacc
tacaatcagttgctaaagcaaactctaagcgaaattgagctatttcgtgtgttctctttg
tcgtcggagttccgtcacatctctgtgcgtgaggaggagaaacttgagctgcagaagctt
atggagcgtgtgccgatacccatcaaggagtcaattgaggaacatagcgccaaagtgaat
gtgctgctgcaggcctacatctctcagcttaagctggagggctttgccttgatgtccgac
atggtgtttatcacacaatccgctgcgcgtctgatgcgtgccatcttcgaaattgtgctg
actcgtggctgggcccagttggcggataaaacgctgacgctttgcaagatgattgatcgt
cgcatgtggcaatcgatgacgccgttgcgccaattcaaaaagatgcccgacgaaatcgct
aagaagctggaaaagaaacactttccctggtcgcgcttgtacgatctggaaccgcatgag
ctgggcgaattgatacgcgtgcccaagctgggcaagacgatacacaagttcgtgcatcag
tttcccaaacttgagctatctacgcacatccagcccataacgcgagcaacgctccgtgta
gagctcacaataacgcccgattttcaatgggatgaaaaggtgcatgggcaatcggaaggt
ttctgggtactgattgaggatgtggactcggagctgatactgcatcatgaattcttcttg
ctgaaacagaaatacgcacaggatgagcatcagctgaagttctttgtgcccgttttcgag
ccattgccaccacaatattttctgcgcattgtttccgatcgctggataggcgccgaaaca
cagctgcccgtatcgtttaggcatcttatattgcccgagaagaatatgccaccgacggaa
ctgctcgacttacagccgctgcccataagcgccttacgccagcccaaatttgaagcattc
tattcgcaacgattcccacaattcaatcctatacagacgcaagtcttcaacgcggtttac
aacagcgatgagaatgtctttgtgggtgctcccacgggatcgggtaaaatgacagttgcc
gaatttgccattatgcgtttgtttagccaaagcagcgagggacgatgcgtctatctggtg
tcccaagaggcgcttgccgatctggtctttgccgactggcataacaaatttggcggtctg
gatattaaggtggtaaaactgacgggcgaaacgggcacggatcttaagcttattgccaag
ggtcagttggttataaccacagcggataaatgggatgtgctctcgcgccgttggaagcaa
cgtaaaaatgtgcagcagatcaatttgttcatcgtcgacgagctgcagctggtgggcggt
gaggagggtcccgtcatggagattgtctgctcccgcatgcgttatatcagctcccaaatt
gaaaaacagatacgtatcgttgctctctccgcctcgctgacagatgctcgtgatgtggcc
cagtggcttggctgcaatccgaatgccacattcaactttcatccaagcgtacggcccata
ccactagagctgcacatacagggcttcaatgtcacccacaacgccacacgcattgcgacc
atgtccaagcctgtgtacaatgccatacttaagtacagcccacataaacccgtaattgta
tttgtttcgtcgcgtaaacaggcgcgtcttacagccattgatatattgacgtatgccgcc
tcggatctgcagccgaatcgtttcttccatgccgaagaggatgatatccagcccttcctc
gagcgcatgtcggacaaaacgttgaaggagacgcttgctcagggcgttgcttatctgcac
gagggtttgtctgcctcggatcatcgcctggtcgagcagctctttgattcgggcgctgtt
cagctggctgttgtctcccgggatctgtgctggggcatgagcatctcggcacatctcgtt
atcgtcatggacacacaattctacaatggcaaaaatcattcgtacgaggattatcccatt
acggatgtgctgcaaatgattggacgcgccaacagacccaacgaggatgcggatgccaag
tgtgtgctgatgtgtcagagttccaaaaaggatttctttaagaaatttatcaacgagccg
ctgccgatcgagagccatttggatcatcgtatgcacgatcacttcaatgccgaggtggtt
accaaaaccattgagaacaaacaagatgccgtggattatctaacatggacattcctctat
cgaagattgactcagaatcccaactactacaatctgcagggcgtcacgcatcgacatttg
tccgatcatctgtcggagctggtggagaatacgctcagcgatctggagcaatccaagtgc
ataagtgttgaagatgatatggatacattgcctctgaacctgggcatgatcgccgcctac
tactatattaactatacgactatagagctcttcagcttgtcgttgaacagtaaaacaaaa
gtacgcggcctattggagattatttcatcggcagccgagtatgaggatgttgtagtgagg
catcacgaggagcaggttctgcgcacgctctcccagcgcttgccaaacaagctaactgga
cccaatgaaacagcacccaaattcaacgatcctcacataaagaccaacttgttgcttcaa
gcgcatctctcacggctgcagctgggaccagagcttcaaggcgatacggagcagatactc
agcaaagcaatacgcctgatacaggcctgcgtggatgtgctaagctccaatggctggctg
tcgccagctgtggccgccatggaactggcccagatggttacacaggctatgtggagcaag
gattcgtatttgcggcagctgccacactttaacgctgatatcatcaaacgctgcacagaa
aaaaaaatcgaaactgttttcgatataatggaactggaggacgaggatcgcacacgcttg
ctgcagctgtccgatgtccaaatggccgatgtggctcgtttttgcaatcgttatcctaac
attgagcttaattacgaggtagttgataaggatcgcatcaactctggctccacggttaat
gtggtggtgcagctggaacgtgaggacgatgttaccggtccggttattgcgccattcttc
ccacagaagcgcgaggagggctggtgggtggtcatcggtgatccaaagaccaattcgttg
ctctccatcaaacgtctgacactgcaacaaaaggctaaagtcaagctggactttgtggcg
cccagtccaggcaagcatgattatacattgtactatatgagcgattcatatttgggatgc
gatcaggaatacaaattctctattgaagtgggcgattttcaatcggagagcgaaagcgaa
tccgactaa
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integrated database retrieval system
