Drosophila hydei: 111595734
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Entry
111595734 CDS
T05888
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
dhe
Drosophila hydei
Pathway
dhe03030
DNA replication
dhe03410
Base excision repair
dhe03420
Nucleotide excision repair
dhe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111595734
03410 Base excision repair
111595734
03420 Nucleotide excision repair
111595734
03430 Mismatch repair
111595734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dhe03032
]
111595734
03400 DNA repair and recombination proteins [BR:
dhe03400
]
111595734
DNA replication proteins [BR:
dhe03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111595734
DNA repair and recombination proteins [BR:
dhe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111595734
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
AAA_30
AAA_14
RuvB_N
AAA_5
BRCT_2
AAA_33
AAA_16
nSTAND3
RCF1-5-like_lid
AAA_18
AAA_7
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
111595734
NCBI-ProteinID:
XP_023165351
UniProt:
A0A6J1LP42
LinkDB
All DBs
Position
Unknown
AA seq
997 aa
AA seq
DB search
MQRGIDSFFKRVPSKKTSDENATSPPTPAPRKRKALVISSDEDEVPASPQISKHGKELKK
SRRTHDAQDNGHATKKPSLSKLKEQPKQLKKVNPSELFGGETTRIEAPKPKERSLIEMED
EAIDRSLMEVDVDEPNPSPVASHKRSKASSPKPKAEAKTPKTELKTPKSKTPKQEKHADL
ESSVLSDEERHERKRMAAALYQKYKNRSSCLNPGSKEIPKGSPDCLKGLTFLVTGILESM
ERDEAASVIKGFGGRVMTVVGKKLNYLVVGEEAGPKKLAQAEEHNVTILSEDGLFDLIRE
KSGESVKATSPEVKQEKNSSPKIKKEHEKSSSKVKREHEDKISPKNKKEHEQKSSSKIMK
EQDEKMGSSKVKQEHEQKSSSKIKKDSHESNNNSFKQEPSSNDLKMKREQGSSAQIKKEP
NNNVDVVKQEDDSMNMALVDKYKPTSIKEIVGQAGPSSNVTKLMNWLSKWYVNHDGTKKT
QRPNPWAKNDDGSFYKAALLSGPPGIGKTTTATLVTKELGFDAVEFNASDTRSKRLLKEE
VSSLLGNKSLADYANGKTQAVSKKHVLIMDEVDGMAGNEDRGGMQELIALIKDSSVPIIC
MCNDRNHPKIRSLVNYCYDLRFQRPRIEQIKGRIMSICFKEKIKMTPAKLEEIIAATNND
IRQTINHIALLSAGEQLPEKCSANQQVASKDLKLGPWEVVRKVFAADEHKHMTIYDKCDL
FFHDYSMAPLFVQQNYLQVMPQGNRNEILSKVAATADALSLGDMVDKRIRANSAWSLLPT
QAVFSSLLPGEYMCGNFTGQINFPGWLGKNSRSNKRSRLAQELHDHTRTCTSGSRQSVRL
EYAPHLLANIVRPLAEDGQEGVPAALQVMKDYHLLREDLESLIELSSWPGKKSPMDAVDG
RVKAALTRAYNKEVMAYSYSAQATVKKKRAEAAVEEDEAGMLYGEEEDGGQIAHSSDDED
DDKLELDGLIKAKKKPAATAKKSGGTGAAKPRAKAKK
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcggtatagactcgttcttcaagcgggttcccagcaagaaaaccagcgacgaa
aatgcaacatcgccgccaacgccggcacctcgcaaacgaaaggccctcgtcatatccagt
gatgaggacgaagtgcccgccagtccgcagataagcaagcacggtaaggagctaaagaaa
tctcggcgtacacacgacgcccaagacaatggacacgccaccaagaagccctcgctgtcc
aagttgaaagagcagcccaagcagctgaagaaggtcaatccatctgagttgtttggcggc
gagactacgcgtatagaggcgcccaagcctaaagagcgtagcctcattgaaatggaagac
gaggccattgatcgcagtctaatggaggtggatgtggatgagccaaatcccagtcccgtg
gccagccacaaaaggagcaaggccagcagcccaaagcctaaggctgaggccaagacgccc
aaaacagagcttaagacgcccaagtcaaagacgccaaaacaggaaaaacatgcggatctg
gagagcagcgtgctgtccgatgaggagcggcacgagcgcaagcgcatggccgccgcgctt
tatcagaagtacaagaatcgcagcagctgcctaaatccgggcagcaaagagatacctaaa
ggatcgcccgattgcttgaaaggattaacattcctggtcactggcatactggagtcaatg
gagcgtgatgaagccgcatcggtcattaagggatttggtggacgtgtcatgacagtcgta
ggcaaaaaactcaactacctggtggtgggcgaggaggcaggtcccaaaaaactagcccaa
gccgaggagcataatgtaacaatactcagcgaggatggcctctttgacttgatacgggaa
aagtcgggcgaaagtgtgaaagcgacgagtcctgaggttaaacaggagaagaatagcagt
ccgaagataaagaaagagcacgagaagagcagctcaaaagttaaaagggagcatgaagat
aagataagtccgaaaaataagaaagagcacgagcaaaagagcagctcaaagattatgaag
gaacaggacgagaagatgggcagctcgaaagtgaagcaggagcatgaacaaaagagcagc
tcaaagattaaaaaggactcgcacgagtcgaacaacaacagcttcaagcaggagccaagc
agtaacgacttaaagatgaagcgtgaacaaggttccagcgcacagattaaaaaggaaccc
aacaacaatgtggatgtggttaaacaagaggatgacagcatgaatatggctttggtggac
aagtacaagcccacttcaatcaaggagattgtgggccaggcaggaccgagcagcaatgta
accaaattgatgaactggctgtccaagtggtatgtgaatcacgatggcaccaagaaaact
cagcggcccaatccgtgggccaaaaatgatgatggcagcttctacaaggcagctctactc
tcaggtccgccgggtataggcaaaacaacaacggcgacactggtgaccaaggagctgggc
ttcgatgcagtggaattcaatgcctcggatacgcgcagcaagcgtctgctcaaggaggag
gtgtccagcctgttgggcaacaagtcgctagctgactatgccaatggcaagacgcaggcg
gtgtccaagaagcatgtgctcatcatggacgaggttgatggcatggcgggcaatgaagat
cgcggcggcatgcaggagctgattgccctgatcaaggacagctctgtgcccatcatatgc
atgtgcaatgatcgcaatcatcccaagatacgctcgctggtcaactattgctacgatttg
cgcttccagcgaccgcgcatcgaacagatcaaggggcgcatcatgagcatatgcttcaag
gagaaaatcaaaatgacaccagccaagctggaggagattatagccgccactaataatgac
ataaggcagaccatcaatcacattgcgctgctcagcgcgggcgagcagctaccagagaaa
tgctccgccaatcaacaggtagcctccaaggacttgaagctgggcccttgggaggtggtg
cgcaaggtcttcgctgccgacgagcacaagcacatgaccatctatgacaaatgtgatttg
ttcttccacgactacagcatggcaccgctttttgtgcagcaaaattatcttcaggtgatg
ccgcagggcaatcgtaatgagattctctccaaggtggcagcgactgcggatgcactcagt
ctgggcgatatggtggataagcgcatacgcgccaactccgcatggagtctgctgccgacg
caggccgtgtttagctctctgctgccaggcgaatatatgtgcggcaattttacgggtcag
ataaattttcccggctggctgggtaagaattcgcgcagtaacaaacgctcacgtctcgcc
caggagctgcacgatcacacgcgcacctgcacctcaggctccaggcagtccgtgcgtctg
gaatatgccccgcatttgctagccaatattgtgcgtccattagctgaagatggccaggaa
ggcgtgcccgctgcgttgcaggtcatgaaggattatcatctgctgcgtgaggatttggaa
tcgctgatcgaactgtccagctggccgggcaaaaagtcgccaatggatgccgtagatggg
cgggtcaaggcggcgcttacacgcgcctacaacaaggaggtgatggcgtattcctattcg
gcacaggccaccgtcaagaagaagcgcgccgaggctgcagtcgaagaggatgaggcgggt
atgctatatggcgaggaggaagatggtggccaaatagcacactctagcgatgatgaggat
gacgacaagctcgaattggatgggttgatcaaggccaaaaagaagccggctgcaacagct
aaaaagtcaggtggaacaggggcagccaaacccagagcaaaagccaagaaataa
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