Drosophila hydei: 111596036
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Entry
111596036 CDS
T05888
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
dhe
Drosophila hydei
Pathway
dhe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111596036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dhe03019
]
111596036
Messenger RNA biogenesis [BR:
dhe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111596036
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
ANAPC3
TPR_1
TPR_4
ANAPC8
Paf67
CODH_A_N
Motif
Other DBs
NCBI-GeneID:
111596036
NCBI-ProteinID:
XP_023165842
UniProt:
A0A6J1LHM3
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MSVLFCFFIFGMDPADSPTKTQDSDDENYNLLCQAHEQFNNREYDRCMELLQQLETKGES
SGLILRHNRAVVNYYKSGCLQHQTLLQELEKLASAKSVPVEPTVSLAMKNAGSAFTVARY
NKAVIYYHRHMYGTALERLAPLVARLEALEKQMAALVATLQLQLLLATNQLNRAEAFLDF
LQYKLNLVASAPSAPSANPSSNAEEPTATAAVGAAVVPTASTVGASATPILDSSVTRAAG
ESGSILQMLQLLTHVLNRKPVVITEDGTPEVAALKAQQYYIMKDFQMAAKQLMRINDDCT
KTGTVTPQLSTCIANNMGVIHLRVRHYAIAAKFFQNALRFDQQLASNLRQSSLQTMGSVR
SCEIMYNLGIAMLHLRRPKEAFHCLLVPVKQYHSNPRLWFRMAEACIMEHEAQKLLGKDR
HTIDSVMNSAGSKPYGAPSTAVPEPTLEFAALCLRSALTLTLQYKASFYRATSPDETLDQ
QDSSQQLWSQTQDNNFCNPSKPISLESMANMLDAIYAAHSFVSLRLGDHVTALEMAKHLL
QSERLSDAHKLLGHMYAGEALMMMDKSGEARDHLEPTFVNSLNALDLETRDWQLKSLDAA
QNVVRYNLAVALALQNDFQAAKSLLVTLNHPIVSKKALTLHRYIELKISATVLH
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgctcttttgtttttttatttttggcatggaccctgcggattctccgacgaaa
acgcaagacagcgatgacgaaaactacaatctgctgtgccaagcccacgaacaattcaac
aatcgcgagtacgaccgctgcatggagctgttacagcagctggaaacgaaaggcgagagc
agcggtctaatactgcgccacaatcgggctgtggtgaattactataaaagcggctgcttg
caacaccagacgttgctccaggaattggagaagctggctagtgccaagtcggtacctgtc
gagccgactgtgtcactcgcaatgaagaatgccggcagcgcctttaccgtggcacgctac
aacaaggcggtcatatattaccatcgtcatatgtacggcacggcgctagagaggctagcg
ccgctggtagctaggctggaggcgctggaaaagcaaatggcagcgctcgttgccacgttg
caactgcagctgctgttggccaccaatcagctaaatcgcgctgaggcgtttctcgatttt
ttgcagtataaattgaatctagtggccagtgcacccagcgcacccagcgcaaatcccagt
agcaacgcagaagagccaacagcaacagcagctgtcggtgctgctgttgttccaacagcg
tccacagtcggggcgagtgcaacgcctattctggacagtagtgttacccgagctgcaggc
gaaagtggaagcattctgcagatgttgcagctgctaacgcatgtgcttaatcgcaaacct
gtagtcataactgaggatgggacaccagaagttgcggcactgaaggcacagcagtattac
atcatgaaggactttcagatggccgctaaacagctgatgcgcattaacgatgactgcact
aagaccggcaccgtcacgccacagctaagcacgtgcatcgccaacaatatgggtgttatc
catttacgtgtaagacattatgcaatcgcggcgaaattttttcagaatgcactgcgcttc
gatcagcagctagcatcgaatttacggcaaagctctctacaaacgatgggctcggtgcga
tcctgtgagataatgtataatctgggcatcgcgatgttgcatttgcgccgacccaaagag
gcttttcactgcctcctggtgccagtaaaacagtaccatagtaatccacgtttgtggttt
cgaatggccgaagcatgcattatggagcatgaggcgcagaaactacttggaaaagatcgc
catacgatagacagtgtcatgaactcagcgggatccaaaccatatggagccccgtccact
gcggtgccggagccaacacttgaatttgcagctctatgtctgcgaagcgctctcacccta
acgctgcaatacaaggccagtttttatagggctacctcgcctgatgaaacactggatcag
caagattcctcccaacagctatggagtcaaacgcaggacaataacttttgcaacccatcg
aaaccaattagcttggaatcgatggctaatatgctggatgccatttatgcggctcatagt
tttgtgtccctacgtttgggtgaccacgtcaccgcactggaaatggccaagcatctgctg
cagagcgagcgtctctctgatgcacacaaattgttgggccacatgtatgcgggcgaggct
ttgatgatgatggacaagtccggggaggcgcgtgaccatctggagccaacttttgttaac
tcgctaaatgctcttgatttagagacacgtgattggcagctaaagtccctggatgctgcc
cagaacgttgttcgatacaatttggctgttgctctcgctttgcagaacgattttcaggcg
gccaaaagtctgctggtgacgctaaaccatccgattgtgagcaaaaaggcgctgacactg
catcgttacatagagctcaaaataagcgccactgtactccattag
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