KEGG   Drosophila hydei: 111596037
Entry
111596037         CDS       T05888                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
dhe  Drosophila hydei
Pathway
dhe03030  DNA replication
dhe03410  Base excision repair
dhe03420  Nucleotide excision repair
dhe03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dhe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111596037
   03410 Base excision repair
    111596037
   03420 Nucleotide excision repair
    111596037
   03430 Mismatch repair
    111596037
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dhe03032]
    111596037
   03036 Chromosome and associated proteins [BR:dhe03036]
    111596037
   03400 DNA repair and recombination proteins [BR:dhe03400]
    111596037
DNA replication proteins [BR:dhe03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    111596037
  DNA Replication Termination Factors
   ELG1-RFC complex
    111596037
Chromosome and associated proteins [BR:dhe03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    111596037
DNA repair and recombination proteins [BR:dhe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     111596037
  Check point factors
   HRAD17(Rad24)-RFC complex
    111596037
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 AAA_16 Rad17 Viral_helicase1 AAA_18 Mg_chelatase nSTAND3 AAA_19 RCF1-5-like_lid AAA_24 MeaB AAA_11 ABC_tran AAA_23 AAA_5 NTPase_1 RuvB_N AAA_assoc_2 DEAD RNA_helicase DNAX_ATPase_lid MnmE_helical AAA_28 AAA_2 AAA_7 AAA_29 AAA_30 SRP54 MCM AAA_3 AMP-binding_C_3 IstB_IS21 KTI12 bpMoxR AAA_33 FtsK_SpoIIIE ATP_bind_1 SRPRB AAA_25 CbiA
Other DBs
NCBI-GeneID: 111596037
NCBI-ProteinID: XP_023165841
UniProt: A0A6J1LJ82
LinkDB
Position
Unknown
AA seq 331 aa
MPEETAIAVVDKRNNLPWIEKYRPVKFDEIVGNEDTVARLSVFSTQGNSPNIIIAGPPGV
GKTTTIQCLARILLGDSYKDAVLELNASNERGIDVVRNKIKMFAQQKVTLPRGRHKIVIL
DEADSMTEGAQQSLRRTMEIYSNTTRFALACNTSEKIIEPIQSRCAMLRFSKLSDAQVLA
KLIEVCQLEQLKYDEDGLEAIVFTAQGDMRQGLNNLQSTAQGFGDITGANVFKVCDEPHP
MLLQDMLQHCAGNDIHKAYKILAKLWRLGYAPEDIIGNIFRVCKRLNVDEQLKLNFIREI
GITHMKIVDGCNSLLQLTSLLARLCVAAESH
NT seq 996 nt   +upstreamnt  +downstreamnt
atgccagaggaaacagcaattgcggttgtggacaagcgcaataatttgccttggatcgaa
aagtatcggcctgttaagttcgatgaaattgtaggcaatgaagatacggtcgcccgttta
tccgtcttctctacccaaggcaattcgccaaatattataattgcaggaccacctggagtg
ggtaagacgacaactatacagtgcttggcccgcatcctactgggcgacagctataaggat
gcggtgcttgagttaaatgcatcgaatgaacgtggaatcgatgtggtgcgcaataaaatt
aagatgtttgcccaacaaaaggtcacccttccacgtggtcgccataagatagtcatcctc
gatgaggcggacagcatgactgagggagcacagcaatcgctgcgacgtaccatggaaatt
tacagtaatacaacgcgttttgcgctcgcttgcaatacgagtgagaaaataattgaacca
attcagtcccgttgcgcgatgctgcgttttagcaaactatccgatgcccaggtgttggct
aagcttatcgaggtgtgtcaactggagcagctcaaatacgatgaggatggattggaggcg
attgtcttcacggcgcagggcgatatgagacaaggtcttaataatttgcaatccacggct
caaggatttggtgatataacgggcgcaaatgttttcaaagtttgtgatgagccgcatccc
atgttgttgcaggatatgttgcaacattgtgccggcaatgatatacataaggcgtacaag
atcttagccaaattgtggcgcctcggctatgcaccggaggatattattggtaatatattt
cgcgtgtgcaagcggttgaatgttgacgaacagttgaagttgaacttcataagagaaatt
ggtatcacgcatatgaagattgtcgatggttgtaattcgctgctgcagttgactagcctt
ttggcacgtctgtgcgtggctgctgagtctcattaa

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