Drosophila hydei: 111597043
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Entry
111597043 CDS
T05888
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
dhe
Drosophila hydei
Pathway
dhe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111597043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dhe03041
]
111597043
03009 Ribosome biogenesis [BR:
dhe03009
]
111597043
Enzymes [BR:
dhe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111597043
Spliceosome [BR:
dhe03041
]
Complex A
U2 snRNP components
U2 related factors
111597043
Complex B
111597043
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
111597043
Ribosome biogenesis [BR:
dhe03009
]
Eukaryotic type
90S particles
Helicases
111597043
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
SRP54
ABC_tran
AAA_25
T2SSE
AAA_7
AAA_30
ATPase
TsaE
PhoH
Motif
Other DBs
NCBI-GeneID:
111597043
NCBI-ProteinID:
XP_023167325
UniProt:
A0A6J1LL76
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MSKRRIEVGETYPKKTRKESTEASTSAAAASAAGTVAQVLGGFVPNKQPPTMNPFTMKPY
STRYQTLYKKRITLPVFEYQADFMRLLSQHQCIVLVGETGSGKTTQIPQWCVDFAVSKGR
KGVSCTQPRRVAAMSVAQRVSEEMDVNLGEEVGYSIRFEDCSSPKTLLKYMTDGMLLREA
MSDPMLDQYQVILLDEAHERTLATDILMGVLKEVIRQRNDLKLVVMSATLDAGKFQQYFD
NAPLMTVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQEEIEEA
CKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFEAAPPPNANGAIGRKVVVSTNIAE
TSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLY
TEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNY
LAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNE
AKKVADEAKQRFAHIDGDHLTLLNVYHAFKQSSEDANWCYENFINFRSLKSADNVRQQLA
RIMDRFNLKRTSTEFTSKDYYVNIRKALVQGFFMQVAHLERTGHYLTIKDNQNVQLHPST
CLDHKPDWVIYNEFVLTTKNYIRTVTDVKPEWLLSLAPQYYDLNNFPQCEAKRQLELLQQ
RMETKQYQKGF
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacggcgtattgaagtgggcgaaacctacccaaaaaagaccagaaaagaatcg
acggaagcctcaacttcagcagcagcggcttcagccgccggcacagttgcccaagtttta
ggcggatttgtccctaataaacagccaccaacgatgaatccgttcacaatgaagccttac
tcaacacgctaccaaaccttgtacaagaagcgaatcacactgccggtattcgagtatcaa
gcggactttatgcgtttgctcagccagcatcagtgtattgttttggtgggcgagactggc
tctggcaaaacgacacaaataccgcaatggtgtgtggattttgctgtgtccaaaggacgc
aagggcgtatcctgtacgcagccacgtcgtgtggccgccatgtccgtggcccaacgtgtt
tctgaagaaatggacgttaacctcggagaggaagtcggctattccattcgttttgaggat
tgctcttcgcccaaaacactgctcaagtacatgacagatggtatgctgctgcgtgaagcc
atgtcagatccaatgctggatcaatatcaggttatattgcttgacgaggcgcacgagcgt
acattggccaccgacatactgatgggcgtactaaaagaggttattcgtcagcggaatgat
ctcaaattagtggtcatgtcggctacactcgatgcaggtaaattccagcagtactttgac
aatgcgccgcttatgaccgtgcctggtcggacgcatcccgttgagatcttctatacacca
gagcccgagagggattatttggaggcagcaatacgcacagttatacagattcatatgtgc
gaggaaattgaaggcgacatacttatgtttctcacgggccaggaagaaattgaagaggct
tgcaagcgtataaagcgcgagattgacaatctaggctcagaaattggcgagctgaagtgc
atacccttgtactcgacactgccacccaatctacaacagcgcattttcgaggcggcaccg
ccgccgaatgcgaacggtgcgatcggccgaaaggttgtggtatccacaaacattgccgaa
acctctctgaccattgatggcgttgtatttgtgattgatcccggctttgccaagcaaaag
gtttacaatccacgtatacgtgtcgagagtctgctcgtatcccccatatctaaagcttcg
gcacagcagcgtgccggccgtgcaggtcgcacacggccaggcaagtgcttcagactttat
acagagaaggcgttcaaaaacgaaatgcaagacaacacctacccagagattttgcggtca
aatttgggcactgtggtgctgcagctcaagaaactgggcattgatgacttggtgcacttt
gatttcatggacccgccggcgcccgagacgctgatgcgtgctttggagctgctcaactac
ttggccgccctcgacgatgatggcaatctaacagatctcggtgctgttatgtccgagttt
cctctggatccacagttggccaagatgctaatagccagttgccagcacaattgctccaac
gagatactttcaattacggctatgctgtcggtgccacaatgtttcgtgcgacccaatgag
gcaaagaaagtggctgacgaggccaagcagcgtttcgctcacatcgacggggatcatctg
acgctgctgaatgtctatcacgccttcaaacagagcagcgaggatgcgaactggtgctat
gagaactttatcaactttcgatcgcttaagagcgctgacaatgtgcgccagcaactggca
cgtatcatggaccgtttcaatctgaagcgcaccagcacggagttcacctcgaaggactac
tatgtcaatatacgcaaagctcttgtccagggcttctttatgcaggttgctcatctggag
cgaacgggacactatctgaccatcaaggacaaccagaacgtgcagctgcatccgtcaaca
tgtctcgaccacaagcccgactgggtcatctacaacgaattcgtgttgaccaccaaaaac
tatatacggactgtgacagacgtgaagcctgaatggctgctcagtctggcgccgcagtac
tacgatctgaacaactttccacaatgcgaggcgaagcgtcagttggagctgctccagcag
cgcatggaaacaaagcagtaccagaagggtttctga
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integrated database retrieval system
