Drosophila hydei: 111597089
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Entry
111597089 CDS
T05888
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13191
RNA-binding protein 16
Organism
dhe
Drosophila hydei
Brite
KEGG Orthology (KO) [BR:
dhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dhe03021
]
111597089
03041 Spliceosome [BR:
dhe03041
]
111597089
Transcription machinery [BR:
dhe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111597089
Spliceosome [BR:
dhe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111597089
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
111597089
NCBI-ProteinID:
XP_023167393
UniProt:
A0A6J1LLF3
LinkDB
All DBs
Position
Unknown
AA seq
1250 aa
AA seq
DB search
MNMETVVAFNNELSGLYDSRPPISKAKMAAITKSAMRAIKFYKHVVQSVEKFILKCKPEY
KVPGLYVIDSIVRQSRHQYGTDKDVFAPRFQRNLTETFANLFRCAPEDKSRIIRVLNLWQ
KNNVFKSDVIQPIFDLADPNHPIYHQMPPIGAGNINSSSGPSGSSGVLNLSDISSGNAAN
GLNASGMSNMDLSGAVDDKMGGAMPDLSNNNLKQLLNDPNVLRQLQTLQNFQKFKQQEEN
QKHRYQDDALQQHLQNVLKGTGGLKPGVGMGMGMGHNDVTDMNKDVEFISEQQPIEVINL
DGADSRSPTPDRDRYKRSRRSSRSRSPRSRGGGGGGGGGNGNDRDRGSRRRSSRSRSRSP
RSSRRRGSRDRDRMERSTRDKERDREHERERRKKGLPDIKKEHLSVCSTTLWVGHLSKLV
YQEELSDTFGEYGDIVSIDQIVPRGCAFIVMNRRQDAHKAMQALKNHKLQGRAITISWAA
GKGVKSKEWKDFWDLDLGVTYVPWNKLSTETDFDSLEEGGMFDEDTMPSWMKQKISQAKN
VKDIKPTGLTGELPTVPSVAPPNLLFGIDTTQPPPVAPPQHGGPGAPPPTMMGMVPGQFQ
MAPPMGGPPPQRLLGPMGPLNHPLGGMAMPPNMVPGMPPPMMMPPNMMPPGFPTMGGPPP
HTMGLPPGAQFPPPGSVPPPMTTIPAPAGSGTGNVSDDQMDIEMELEDAPQSAPSQQQQP
PNFSQPPPIFAGGATQPNSVDVTGAAAANDLFQRDRTRGPGGAGSRWGGREDIAEASERW
RNENGGGGPQPLSGAFNEARARLNLNSMEHGGMQRPEFLGGLEFDNRSGGGPRGMGPGPR
GSNHNGGNGGGDFFQPNINQNRFSQPTSLMQMRIPPPVAFNQRMGGPGAGNGVGPMFMRN
QGGGPGGRQQGPGFFNPRNPFNDNQRGRGGGGGGGSGGRGMGGGGGRGGRWSDDEEDGGN
NSNNFKRRGGGGPGGPGSRFRGERDGDERRGGNGRGGRGSQRSEERERGPNNNNRRGSRD
DNNRHSISSTDENAMQGKRSSSEPDDMKNKPVAAPSVDNVEKSTTVDTEEDWDRELQEYD
ARMEAQQAAETAAAAAAAEAAAAGASTPTDTFDIQNQKTKPLDKAAPTSEAETFATPAVE
ENSEMSKTKVPSPVCTPLYDELPPPSSAAATTAPPQQVEQVEEPNPKIEQRVTEDFVPEP
EHTFAPATTHQLDSPPIAKQSPTTTTEPTKDIAEDTEPVESAQPAVEADS
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggagacggtcgtcgctttcaataatgagctctccggactctatgatagccgg
ccgcccatatcgaaggctaaaatggccgccatcacaaagtcggcaatgcgtgcaattaaa
ttctataagcatgtcgtgcagagtgttgaaaagtttatactcaaatgcaagccagagtac
aaagtgccgggcttgtatgtcatagactcaattgtgcggcaatcgcgtcatcaatatggc
accgataaggatgtcttcgcgccccgcttccagcgcaatctcaccgaaacgtttgccaat
ctgtttcgatgcgcacccgaagataagagtcgcatcattcgcgtgcttaatctatggcag
aagaacaatgtctttaaatcggatgtcatacagccaatatttgatttggctgatccaaat
catcctatttaccaccaaatgccaccaatcggagccggcaacatcaactcgagctcagga
ccaagtggcagcagtggtgttctaaatctctcggacatttcaagtggcaatgctgccaat
ggtcttaatgcctccggaatgagcaacatggatctaagtggcgctgttgacgacaaaatg
ggtggtgcaatgccagatctatcgaacaataacttgaagcagctgctcaatgatcccaac
gtgctacgccaattgcaaacgctgcaaaactttcaaaagttcaagcagcaagaggaaaat
caaaagcatcgctaccaggacgatgcgctgcagcagcatttgcagaatgttcttaaggga
acaggtggcttgaaaccgggcgttggcatgggcatgggcatgggtcataatgatgtgacg
gacatgaacaaggatgtcgaattcatatcggaacaacaacccattgaggttatcaatctg
gatggtgccgattctcgtagtccgacgcccgatcgtgaccgttacaagcgcagtcgacgc
agcagccgcagtagatcaccccgtagtcgcggtggcggtggtggtggtggtggtggcaat
ggaaacgatcgtgatcggggaagtcgccgtcgcagctcacgttcgcgcagccgctcgcca
cgttccagccgaaggcgcggatcgcgcgatcgtgatcgtatggagcgcagcacgcgcgac
aaggagcgggatcgcgaacatgaacgtgagcgccgcaagaagggcctgcccgacattaaa
aaggaacatctaagtgtgtgcagcaccacgctgtgggtgggccatctctccaagctggta
tatcaggaggagctgtcggatacattcggcgaatatggcgatatcgtaagcatcgatcag
attgtgccgagaggttgcgctttcatcgtgatgaatcgtcgccaagacgcgcacaaggcc
atgcaggcgcttaagaatcacaagctacaaggtcgtgccattaccatttcctgggcagcc
ggcaaaggtgtgaagagcaaggagtggaaggacttttgggatcttgacctcggtgtcaca
tatgtgccgtggaacaaactgagtaccgaaacggattttgacagtctggaggaaggcggc
atgttcgatgaggacaccatgcccagctggatgaagcagaaaatcagtcaggcgaaaaat
gttaaagatatcaaaccgacaggcctaaccggcgaattgccgactgtgccgtcagtggcg
cctccaaacttgctcttcggcattgacacaacacagccaccgccagtggcgccgccacag
cacggcggacctggtgcacctcctccaacaatgatgggcatggtgcccggtcagttccag
atggcgccgcctatgggcggaccgccaccacaacgcttgttgggacccatgggaccacta
aatcatcctttgggcggtatggctatgcccccaaatatggtgcccggtatgccgccgcca
atgatgatgccgcctaacatgatgccaccaggttttccgaccatgggcggtcctcctcca
catactatgggactgccgcctggcgcacagttccccccaccagggtcagtgcctccaccc
atgaccacaattccagcacctgcgggttctggcactggcaacgtgagcgacgatcaaatg
gacatagaaatggagcttgaggatgcaccgcaatctgcaccatcacagcagcaacagcca
cctaactttagccagccgccaccgatctttgccggtggtgccacgcagcctaacagtgtt
gatgtgaccggagcggctgctgcaaatgatctgtttcagagggatcgaacacgtggtcct
ggtggcgccggctctcgctggggcggccgtgaagacattgctgaggcttcagaacgctgg
aggaatgagaatggaggaggtggaccgcagccgctaagcggagcctttaatgaggcacga
gcgcgtctcaatctaaatagcatggaacatggtggaatgcaacgtccagaattcttggga
ggcttagaatttgataatcgttctggcggtggaccacgtggcatgggaccgggcccaaga
ggtagcaatcataatggaggcaatggcggaggtgacttcttccagcccaatatcaatcag
aatcgcttcagtcagccaacaagtctgatgcagatgcgcataccgccaccggtggcgttc
aatcagcgcatgggtggaccgggtgcaggcaatggcgtgggccccatgttcatgagaaac
caaggtggtggaccaggtggtagacaacaaggaccagggttcttcaatccacgcaatccg
tttaacgataaccaacgcggtcgcggcggtggtggcggcggcggtagcggtggtcgtgga
atgggaggcggtggaggtcgcggtggccggtggagtgatgatgaggaagatggaggaaac
aatagcaacaatttcaaacgccgtggaggcggtggcccaggtggccctggcagccgattc
cgtggcgaacgtgatggcgatgaaaggcgcggaggcaacggacgtggtggacgtggcagt
cagcgcagcgaagagcgtgaacgcggacctaacaataataacagacgtggctcacgcgat
gacaataatcgtcactcgataagctccactgatgaaaacgcaatgcagggaaaacggtca
tcgtcggagccggatgatatgaaaaataaaccggtggcagcgccatccgtggacaatgta
gaaaagtcaacaacagtagataccgaggaggactgggatagagaactgcaggagtatgat
gctagaatggaagcgcaacaagctgctgaaactgctgcagccgctgcggcggctgaagcc
gctgccgctggagcttctactcccacagatacctttgatattcaaaaccagaaaacgaaa
ccactggacaaggcagcacccacgtcagaagcagagacatttgccacaccagctgtggag
gagaatagcgagatgtcgaagacgaaggtcccgtcacctgtctgcacgcccctctatgac
gagttgccgccaccatcttcagctgctgcaacaacggcgccgcctcagcaagttgagcag
gttgaagagccaaatccaaagatcgaacagcgtgtgactgaagactttgtgcctgagcct
gagcatacgtttgcgcctgcaacaacacaccaacttgattcaccacccattgcaaagcag
tcacccacaacaacaacagaaccaacgaaagacatagcggaagatactgagccagttgaa
agtgcccagccagcagtagaggcagactcatag
DBGET
integrated database retrieval system
