Drosophila hydei: 111599696
Help
Entry
111599696 CDS
T05888
Name
(RefSeq) protein CLP1 homolog isoform X1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
dhe
Drosophila hydei
Pathway
dhe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dhe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111599696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dhe03019
]
111599696
Enzymes [BR:
dhe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
111599696
Messenger RNA biogenesis [BR:
dhe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
111599696
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
MMR_HSR1
nSTAND3
AAA_22
AAA_18
AAA_16
TniB
CbiA
AAA_29
GTP_EFTU
ATP_bind_1
AAA_35
AAA_14
Motif
Other DBs
NCBI-GeneID:
111599696
NCBI-ProteinID:
XP_023171184
UniProt:
A0A6J1LVJ6
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MSEDNTHVREYILDADSELRFEIEQKDAKVFVTLISGFAELFGTELVKKKKYEFGIGAKV
AIFTYQGCVLQVTGKMDVCYISKETPMVQYINCHAALEQFRIEAEEQDKRGPVILIVGPM
DVGKSTLCRILLNYAVRVGRRPLYADLDVGQGAISISGNIATILIERPASVEEGFAKTAP
LVYHFGHKSPSGNSVLYNAVVSKMAEVTLQSLDANKRTKSSGIIVNTCGWVKGYGYKHLL
HAARAYRARAIFVLDQERLYNDLLRDVPTNVHVVLLPKSGGVVERTKELRHESREQRIKE
YFYGNMRTPFYPFSFEVKFQDLRLYKIGAPPLPDSCMPIGMKAEDNKKKVVAVTPTPSLL
HHILTLSFAESTDENVIGTNIAGFCCVTEVDMERQSVMLLSPQPRPLPANALLLWSELQF
MDNHA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagacaatactcatgtcagggaatatatattggacgcggactctgagcttcga
tttgaaatcgagcaaaaagatgccaaagttttcgtgacgctcatctccgggtttgcagag
ctctttggcactgaattggtaaagaaaaagaaatatgaatttggcatcggcgccaaagtg
gctatatttacctaccaaggctgcgtgctgcaagtgacgggcaaaatggatgtgtgttat
atttctaaagagacaccgatggtacaatatataaattgccacgccgctttagagcagttt
cgaatcgaagccgaagaacaggataaacgtggcccagttattctaattgtagggcccatg
gacgtgggtaagagcacactgtgtcgcattctgttaaattatgcagtacgcgtaggcaga
cgaccgctttacgcagatctcgatgtgggccaaggcgctatttccatttccggcaatata
gctactatcctcattgaacgaccagctagtgttgaggaaggatttgcaaaaacagcacca
ttagtttatcattttggtcacaaatctcctagtggcaacagcgtgctttacaatgctgta
gtatcgaaaatggctgaagtgacactgcaatcgttggacgccaataaacggactaaaagc
tcaggcattattgtcaacacctgtggttgggttaagggttacggctataaacatttgctg
catgctgcccgagcttatcgcgctcgtgccatttttgtattggaccaggaacgtttgtac
aatgatctgttgcgggatgtaccgaccaacgttcatgttgttctcttgccaaaaagtggc
ggcgtggtagagcgtactaaagaattaaggcatgaatcacgcgagcagcgtataaaggaa
tatttttatggcaatatgcgtacgcctttttatccattttcgtttgaagtaaaatttcaa
gatctacggttatacaaaattggcgctccaccattgcccgattcctgcatgccgatcggt
atgaaggcggaagacaacaaaaaaaaagttgtagcagttacaccgacgccatctctacta
catcacattcttacattaagttttgcagagtcgacggatgaaaatgtcattggtactaat
attgctggattttgttgcgtcacggaggtggacatggagcgacaatctgtaatgttgctc
tctccacagccacgaccattgcctgcgaatgcgctgttgttgtggtctgaattacagttt
atggacaatcatgcctaa
DBGET
integrated database retrieval system
