Drosophila hydei: 111601428
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Entry
111601428 CDS
T05888
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
dhe
Drosophila hydei
Pathway
dhe03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dhe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111601428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dhe03021
]
111601428
03036 Chromosome and associated proteins [BR:
dhe03036
]
111601428
Transcription machinery [BR:
dhe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111601428
Chromosome and associated proteins [BR:
dhe03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111601428
PBAF complex
111601428
GBAF(ncBAF) complex
111601428
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
111601428
NCBI-ProteinID:
XP_023173772
UniProt:
A0A6J1LZA9
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MNTLGPKKDGSPNIDFFQSPETLQGFESIRLWLQKNCKKYLAHSSEPITKESLAQLLILF
LQYVEAKLGKNSAEPPATRIPMRCFLDFKNGGGLCIIFSTMFRFRAEQRGKKFDFSIGKN
PTRKDPNIQLLIEIEQALVEADLYRIPYIYIRPEIEKSFETRLREILDNRRVEIVTDEED
ATHIVYPVVDPHPDEYARPIFKRGNHVMLHWYYFPESYDSWTLNSFDLPDNIPENPESPA
ERWRVAASWILDLEQYNEWMAEEDYEVDELGKKKTHKQRMSIDDIMSFGDDKKKPTTSSG
TGKQKRRRSPSPTTSTSTSKPGKRKRSPAVIHKKSRNDEDDEDLTRDLDDPPAEPNIQEV
HKATHSALQSTASPAPGSKSRGDNDMMPIKGGTMTDLDDEMTGGSAAQAMSAGDGDNSQT
GKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSK
NKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQ
IDADLRPTPMGPPPTSHFHILSDTPSGLQAINPQKTQQPSAAKTLLDLDKKPMGKEGGVD
CDKGSGGALGIKTETLENGAASGLASGVSQFGLKLDQYAKKPAAMKNRTAANMSREWTDQ
ETLLLLEGLEMHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPI
PFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHMKNVEKASA
GGKFNPNFGLANSGIAGTGNDKDDDESKEGNNSSSTAGGNDEEIKDINKKDDDAKSKDKT
KSDKLNTNTDSSSTSTTSTTTTTTTTTTATATSNTTTTNNTDKKSKDSSPSLDAADKANK
TDKTSNASSKTASNSSPTETGTNNDIEIKTEDNSGDGETKDGSNDTNSGGPSSKDGAFSE
NNMQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELEATMER
EREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQELQQQGQVGAAVGAMVMPP
QQQQQQQQQLPPPHHPQQQQAQQQHPLQPPAPQQLGAPSVQHQPLPTHIPVAAPNGAPFT
APPVVAPAAAPPPTPSGELPAPVAQSQAPTPMDTTPPANAPPVAEVASVATVAPSSAPAP
SIPAASVPAANPPPPSS
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgaacactctcggtcctaaaaaggacggaagtcccaacattgactttttccaatcgcct
gagacgctgcaaggttttgagtctatacgactatggctacaaaagaattgtaaaaagtat
ttggcgcatagctcagaaccaataacgaaggaatcactcgcacagcttttaatactattt
ttgcaatatgtggaagctaaattggggaaaaactcggcagaaccgccggcgacgagaatc
ccgatgcgctgttttttggatttcaaaaatggaggaggtctttgtataattttctctacc
atgtttcgttttcgtgccgagcaacgtggcaagaaatttgatttttctattggcaagaat
ccaacccgcaaagaccccaacatacaattactgatcgagatcgagcaagctctagtggag
gcagatctctatcgcataccttacatttatatcagaccagagattgagaagagttttgag
acacgactacgtgagattctcgacaatcgacgggtagaaatcgtcactgacgaggaggat
gccacacacatcgtctatcccgtggtggatccacatcctgatgaatatgctcgacctatt
tttaagcgtggcaatcatgtcatgcttcactggtactacttccctgagtcatatgactct
tggacgctgaacagcttcgatttgcccgataatatacccgagaatccggaatcgcctgca
gaacgttggcgagtggctgcctcgtggattttggatctggagcagtacaacgagtggatg
gcagaggaagattacgaggttgatgaattgggcaaaaaaaagacgcacaaacagcgtatg
tccatcgacgacataatgtcctttggcgatgataaaaagaagcccaccacaagcagtgga
actggtaaacaaaaacgacgtcgctcgccgtcgcccaccacctccacatccacatcgaag
ccgggcaagcgaaagcgctccccagctgtcatacataagaaatcacgaaatgacgaggat
gatgaggatcttactcgggacctcgatgatccaccggcggagcctaatatccaggaagtg
cataaggcaacgcattcggcgctgcaatcgacagccagtccagcacccggtagcaaatca
cgtggtgacaacgatatgatgcccattaaaggtggcaccatgactgatttagatgatgaa
atgaccggcggtagtgctgcgcaagcgatgtccgctggcgatggcgacaattcacagacg
ggcaaaacgagcgacaacagcaatacccaggaattttcatcgtctgccaaggaagacatg
gaagacaatgtgaccgagcagacgcatcacataattgtgccctcatattccgcctggttt
gactacaactcgattcatgtcattgagaaacgcgccatgcccgagttcttcaacagcaag
aacaaatccaagacgccagagatttacatggcttatcgcaatttcatgattgacacctat
aggttgaatcctactgaatacttaacgagtacagcttgtcgacgtaatttggcaggcgat
gtgtgcgccataatgcgcgtgcatgcatttttggagcagtggggtctgattaactatcag
attgacgctgatctgcgtcctacgccaatgggcccgcctcccacctcgcactttcacata
ctgtcggatacgccatcaggtttgcaggcgatcaatccccaaaaaacacagcaaccatcg
gcggccaagacactacttgatcttgataagaaaccgatgggcaaggaaggtggcgtggat
tgcgataaaggcagtggcggcgccctgggcattaagacggaaacactggagaatggtgca
gccagcggtttagcttctggggttagtcagtttggtctgaagttggatcaatatgccaaa
aaaccggccgccatgaaaaatcgtacggcggcgaacatgtcgcgagagtggaccgatcaa
gagacgttgcttctgctcgagggtctcgagatgcacaaggacgattggaataaggtgtgc
gagcatgtgggtacccgcacacaagacgaatgcattttacatttcctgcgtctgcccatc
gaggatccgtaccttgaagatgacggcggctttctgggaccgcttggctgtcagccaatt
ccatttagcaagtcaggcaatccaattatgtcgacagtagcatttttggcatccgtggta
gatccacgtgttgctgctgccgctgcgaaggctgccatggaggaattcgccgccataaag
gatgaggtgcctgctactataatggacaaccatatgaagaacgtggaaaaggcctctgca
ggtggcaaattcaatcccaactttggtctggcgaacagcggcattgctggcacaggcaac
gacaaggacgacgacgaatcaaaggagggaaacaacagcagctccacggcaggcggcaac
gatgaggaaataaaggatattaacaaaaaagacgacgatgccaagtccaaagacaaaacg
aaatcggataagctcaacacaaacacagactcaagttccacatcaacaacatcaacaaca
acaacaactacaactacaacaacagctacagcaacaagcaacacgaccaccaccaataac
acagataaaaagtctaaagattcgtcaccgtcattggacgcagccgacaaagccaataaa
accgacaaaacgagcaacgcctcaagcaaaacggcttccaactcctcacccacagagact
ggcacgaacaacgatattgagatcaaaaccgaagacaacagtggagacggtgagaccaag
gatggcagtaacgatacaaatagcggtggtccttcatctaaggatggagccttcagcgag
aacaatatgcaaacggcagctgccgcagcattggcatcggcagctgtcaaagcaaagcat
ttggcagcgctggaagaacgcaagatcaagtctctagtagcgttgctggtggagacacaa
atgaagaagctggaaatcaaattgaggcatttcgaggagctggaggccactatggagcgt
gagcgtgaaggactcgaataccagcgacagcagctcattactgagcgccagcaatttcat
ctggagcagctgaaggcagccgagtttcgagcgcggcaacaggcgcatcaccgtctgcag
caggagctgcaacaacagggacaggtgggtgccgcagtaggtgccatggtaatgccaccg
cagcagcagcagcaacaacaacagcaactaccgccgccacatcatccccaacaacagcag
gcacagcagcaacatccactccaaccaccggcgccccagcagctgggagcgccttcggtg
cagcaccaaccgttgccgacgcacatacctgtagcagcaccaaatggtgcaccattcaca
gcaccgccagttgtggcacctgcggcagcaccgccaccaacaccatcaggcgagctgcct
gcacctgtggctcaatctcaggcgcccacaccaatggatactacaccgccagctaatgct
ccacctgttgccgaggtcgccagcgtggcaacagttgcgcctagttctgcgcctgctcca
agcattcctgcggcaagcgttcctgctgctaatcctcctcctccttcatcttaa
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integrated database retrieval system
