Drosophila hydei: 111602615
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Entry
111602615 CDS
T05888
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
dhe
Drosophila hydei
Pathway
dhe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111602615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dhe03019
]
111602615
Messenger RNA biogenesis [BR:
dhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111602615
mRNA degradation factors
5'-3' decay
Decapping complex
111602615
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Complex1_LYR_2
Motif
Other DBs
NCBI-GeneID:
111602615
NCBI-ProteinID:
XP_023175548
UniProt:
A0A6J1M654
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MDDSFFGFDTTTSLPDDDGSDGRIAEPPEEEYDALNDETFGSAINGDWEEAHETLVLLGG
NGEKARKDFRDQDLSGNGAFFNRQQRGFQSGSIDDLDLELNLSSIKLDDVDLSTFGETDG
SNRIKLDSGVWTNNPPFPMSSNQNLFRDNFRSAFKPQPQAAATVMAITQIKPLQEANANF
GIPPLPTAATAKISTLEDIERNLIIQQAVPKPQQQQQPQQQLHQQHPQPLHQQELNLTNR
QHLVVTPTLAQHQQQLQKQPQHKAPPGFLAAPQTPPPRQNMGFHGPHPMGGSGPGPGLMP
TPQSQHQQLNGISANRVPPGFMYQTGLATNLPQHALLQQHVLPANFPRPLPNPHLPTALN
NFAMHPSFNAMRAVGMHPAAYMQPVLPPRLPPHNLLNQQPNSMYNMFNMRLVQEIQQNHP
LLQNAAVVRQQQQSRPGERQKQQQQSVPQQMQQQQQQQQQINRYGGNLPQEEFDDYANLM
STRDKHWLIGIQLSQLNTDTPYIDDYYYTVHRQRKNGQVRHSQAHKDNQLNHPLTQPRGH
AQLILVQLGNKNGSRNGQQHRERRNSDNTSSSNASGITNSGNNSNALSGYIFSPLKFENS
LGKLQYGSVTAPRKIIDAEIMGSDTTTADNTVSASSAARQSTEKSNEGQGEVILVPSSMR
KSRHILLHIETLYRYLLKLEDLESPEVMATIILKKKKESERIAAVEQLEMANKTPEERAA
EANNPQSMNPALKNKFNYEIEPRDILVSKLKAGLTFNKVVSMMNVRKGKILLRRIMPFIS
DQTIRWTVWSGVFCSLQNVVKKDREDLEGCLYALYPEFKNQIHEANLETIINISTAFTMN
DKKMSGIFCSRFGILSLVGIILRVEAIYISNLDSTLTEENRQKWREFLAQVASCLNRTIQ
NQTISAAIESDAIQPMMNHFARFKDLKLDALLALITQAKHQIN
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggacgattcgtttttcggatttgatacaactacaagtttaccggatgatgatggcagt
gatgggcgaattgcggaacccccggaagaggagtacgacgcccttaatgatgagacgttc
ggttcagccataaacggcgactgggaggaagcccacgaaacgcttgtcctacttggcggc
aacggcgaaaaagctcgtaaagattttagagatcaagaccttagcggtaatggtgctttt
tttaatcgacagcagcgtgggtttcagagtgggagcatcgacgacttagatttggaacta
aatttatcgtcaataaaattagatgacgtcgatttaagtacgttcggtgaaaccgatgga
agcaatcgcattaagttggactcaggcgtctggactaacaatcccccctttccaatgtcc
agcaatcaaaatcttttccgagacaactttcgcagcgcatttaagcctcagccgcaggca
gccgcaacggtaatggcaatcacacaaataaagccactgcaggaggcaaatgccaatttt
gggataccgccgttgccaacagccgcgacagctaaaatctcaacacttgaagacattgaa
cgtaatttaatcatacaacaggcagtacccaaaccacaacaacaacaacaaccacaacaa
cagctacatcagcagcatccacagcctctgcaccaacaggaattgaatttaactaatcgg
cagcatttggtggtaacgccaacattagcgcaacaccaacaacagctacaaaagcaaccg
cagcacaaggcccctcctggatttttagccgcgcctcaaacaccgccaccaaggcaaaat
atgggttttcatggtccacatccgatgggtggatccggcccaggaccgggtctaatgcca
acgccgcaatcacaacaccaacagttaaatggaatcagtgcgaatcgtgtgccgcctggg
tttatgtatcaaactggcctagctacgaatctgccacagcatgcattattgcaacaacat
gttttgccggccaattttccacgtccactgccaaatccacatttacccacggcgcttaac
aactttgccatgcatccaagcttcaatgcgatgcgcgcagttggcatgcatccggcggct
tatatgcagcctgtgctaccgccacgcctacctccacacaatctgcttaatcagcaaccc
aactcaatgtataacatgtttaatatgcgactggttcaggaaattcaacagaatcatccg
cttcttcagaatgcggcagtggttcgtcaacagcagcaaagtcgacccggcgaacgccaa
aaacagcagcagcagtcggttcctcagcagatgcaacaacagcaacagcaacaacagcaa
atcaatcgctatggcggcaacctgcctcaagaagaattcgacgattacgccaatctgatg
agcacacgcgataagcattggctaattggaatccagctatcacagctgaacacggacaca
ccatacattgacgactactattacacggtacacaggcagcgtaagaatggtcaggttcgt
catagtcaggcacacaaggacaaccaactaaatcatccactgacgcagccccggggtcat
gcgcagcttattctggttcagttgggcaacaaaaatggctcgcgtaacggccaacaacat
cgcgaaaggcgcaactcggacaatacgagcagcagcaatgccagtggcattacaaacagt
ggcaacaacagcaacgccctatctggatatatattttctcccttgaagtttgaaaattct
ctgggcaagttacagtatggaagtgttacagcaccccgcaagattattgatgctgaaatc
atggggagtgacacaacaactgcggacaatactgtatcagcatcatctgctgctagacaa
agcactgagaaaagcaatgaaggtcaaggtgaggtgatccttgtgccgagcagcatgcga
aaatcgcgacacattttgctacacatagagaccctatataggtatctgcttaagttggag
gacttggagagtcccgaggtaatggcaacaattattttaaaaaagaaaaaggagagcgaa
cgcatagctgctgtggagcaacttgaaatggcaaataaaacacctgaagagcgtgcggct
gaagcaaataatccgcaatctatgaatccagcgctaaaaaataaattcaattatgaaatc
gagccgcgcgatattttagtgagtaaactgaaagcaggcctcacttttaataaggttgta
tccatgatgaacgtgcgcaaaggcaagatactattacgtcggattatgccatttatttct
gatcagacaatacgctggacagtttggagtggtgtattctgttcactgcaaaatgttgtt
aaaaaagatcgagaagatttggaaggttgtctctatgcgctttatccggagtttaaaaat
caaatacatgaagcgaatttagaaacaattatcaacatttcaactgcgtttacaatgaat
gataaaaagatgtcgggcattttctgtagtcgctttggcattctatcacttgtcggaatt
atactacgggtagaagccatttacatttcaaacctcgattcaacgcttaccgaggagaac
cgacaaaaatggcgtgagtttcttgcgcaggttgcttcctgccttaatcgcaccatacaa
aatcaaaccatctcagcggcaattgagtctgatgcaattcaacccatgatgaatcacttt
gcgcgtttcaaagacttgaaactagatgcgcttctagctttaattacccaagctaaacat
caaattaattaa
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