Drosophila hydei: 111604364
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Entry
111604364 CDS
T05888
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
dhe
Drosophila hydei
Brite
KEGG Orthology (KO) [BR:
dhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dhe03036
]
111604364
Chromosome and associated proteins [BR:
dhe03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111604364
microRNA pathway
RISC loading complex
111604364
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dimer
Ribonucleas_3_3
ResIII
DEAD
PAZ
Dicer_platform
Helicase_C
Dicer_dsRBD
SWI2_SNF2
dsrm
DSRM_2
Motif
Other DBs
NCBI-GeneID:
111604364
NCBI-ProteinID:
XP_023178200
UniProt:
A0A6J1MC26
LinkDB
All DBs
Position
Unknown
AA seq
1728 aa
AA seq
DB search
MSANNEDDKVEARSYQLRLVEYITKRNGIIYLPTGSGKTYVAILAIKRFSQNMDKSIEEG
GQRALFLCNTVELARQQAICVRKLTNFKVGFYVGEQGTDSWKKNKWDEEIHNNQVLVATA
QVILDLISENFMSLSSVSIVIIDECHHGTGKHPYHEFMKLVQMKMESGFKKLPRVVGLTG
VLIKGNEIKDVSKKLRTLETTYCGNIITVSDTKELENVMLYSTKPKEYLITYDSKMHQFE
KIEEMRQRILKYFTVLDLQEIGHQPVRMSKGMRMQRDPNKKSAIKQMLNDFLFQVDNYGI
YAGSIAIVSVLVDFEIKRRQAETLSLRNMYRSAITLCESVRHTLVSKMRDMLDDDEMSDD
MLNTEDVIMNFSTPRVQLFLQYLKQTFANKQPKDICCLVFVERRYTCKCIYGLLLNYIAA
TPELRNVISPQFIVGRNSIFHDFDNILERRWGKTAIQEFRNGEANLMICSSVLEEGIDVQ
ACNYVIILDPIKTFNMYVQTKGRARSKEASFIIITSDQEKQKTTTQILQYRKAHADIGEY
LKDRVLERADPQMDEINEHFQEDIPPFISAKGAVLLASSALSLVHRYCQQMPSDAFGIVL
PWFKLLDPPESQKLSKDCRKCIVSITLPLNSTLRETLYGDPMSCSHLAKVSAAFKACVKL
YQLGELNERFLPTTVNERVAEIANIHFEHWKKYGDNVTSNRRDREETNSSLKTYAIKYPE
ELNDAMPQVGTECYAYEVTMEAHYDRNDYTSHIYDSLQTRRNYALLLRKRLPRLAEMPLF
NHQGKMHVHVAEEPSKVVIQTEEQLEQLQHFHVMIFRDILRIWQPFFVLDRHSNENCFLV
VPLSATPGVGIDWPLVEHFQRLPKAQARSLAERHQMPPPNPQDYVGTVVTQWYANYDEKR
MMVTKVHTDLSPLSMMEEKQQGKSYYEFTMAKYRNYIGDVVHKQQFLLEVRELSDQLNFY
VQQRVKSSAQSKARAKVMLIPELCFNFGFPGDLWVKLLFLPSILRRLHFMLHAETLRVRI
NEYLGLDKMPQNGVDYRPRALEIDWSLRRNVDHQGNAMHADDCEEPRPLLEPLPTKGVEK
AMERLNITDLEVPWQQYMEPRDIDRNVMTTYPVELSYFFNFTRGKNNCFDKMEDDDKELW
TQRQFKMSEGNIYSCQARSNKLPALMPASMDNGKRVEQVVLSVLQHSISNEHITPAEQGE
YLAAITYAGSVDVFDMERFELLGDCFLKLSATLYLANKYPDWNEGILTQVKSTLVSNRNL
LYCLSDTDIPHRICSTLFTPKYTWLPPCVALPQNVKELWKENPCLAALVGPHNLRNLSIS
EEELFGDGNCGKQSLSNFISGCQSNQHSHHAGTDFSSEINFCLGQVQMPNKLIADTLEAI
LGVVVKNYGLHHGFRMLEYFGICKPDIGKPLTQLLDLKLGGSRMRTNISQREVDGFLINH
QFLEQNLGYTFRDRAYLLQALTHPSNPTNRLTGCYQELEFIGDAILDFLISAYIFEHKTR
MTPGQLTDLRSALVNNTTLACICVRHRFHFFILAENALLSESIQSFVQFQETQHHRVTNH
VRILMEEKDVQPEPLDSDDELEMAELAAKQPKQTIKDANSPQEGEFNISHNVEVPKALGD
VLEALIAAVYLDCRDLNTTWQVVYKMFEPELLEFSRNVPLNPIRQLFEHKLAKPTFSSPV
MDNNLVMVTCQFICMDKTMKVYGFGSNGKQAKLSAAKHALQKLAKCDV
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaaataatgaagatgacaaagtcgaggcacgaagctaccaactgcgccttgtg
gaatacattactaaacgaaatggtattatttatttgcccactggctcgggcaagacctac
gtggccatcctggccatcaagcgtttctcccaaaacatggacaaatcgatcgaagagggc
ggtcagcgtgctttattcctttgcaacaccgttgagttggctcgacagcaagctatctgt
gtgcgaaagcttacgaacttcaaagtcggattctatgtcggcgaacagggcacggatagt
tggaaaaaaaacaaatgggatgaggaaatacataataatcaagtactggtggccacagct
caggtgatactcgatttaattagcgaaaatttcatgtcactgagttcggtgagcattgtg
attatagacgaatgccatcatggcactggcaagcacccatatcatgagtttatgaaactt
gtccaaatgaaaatggaatcaggtttcaaaaagttgccccgagtcgttggactgaccggc
gtcctgattaaaggcaacgaaatcaaggatgtgtccaagaagttgagaacactcgaaacc
acatattgtggcaatataatcaccgtctctgacaccaaagaattggagaacgtaatgctt
tactcgacaaaaccgaaagaatacctaattacatatgactccaaaatgcaccagtttgaa
aaaattgaagaaatgaggcaacgcatcttaaaatactttacggtactggatctccaagag
attgggcatcagccggtgcgcatgtcgaagggaatgcgaatgcagcgtgatccgaataag
aagagcgccattaagcaaatgcttaatgactttctattccaagtagataactatggcatc
tatgcgggatccatagcaatcgtctccgtgttagtcgacttcgaaattaagcggcgacag
gctgagacactgagcttgcggaatatgtatcgctcagctatcacgctctgcgagagcgtg
cgtcatacgctggtttccaagatgcgcgacatgttggacgatgatgagatgtctgacgac
atgctcaatacagaggatgtgatcatgaacttctccacgccgagagtgcaattatttttg
cagtatctgaagcaaacctttgccaacaagcagcccaaagacatttgctgtctggtcttc
gtggaacgtcgctatacatgtaaatgtatctatggactgctacttaactatatcgcagcc
actccagagttacgaaatgtaattagtccacaatttatagttggacgtaatagtatcttc
cacgatttcgacaacattctcgaaagacgctgggggaaaacggccattcaagaatttcgt
aatggtgaggcaaacttgatgatatgctcgagcgtcctagaggaaggcatagatgtacag
gcctgcaactatgtgatcatattggatccgataaagacgtttaacatgtatgtgcagacc
aaagggcgtgcacgctcaaaggaagcatcattcattatcatcacgtctgatcaggaaaag
caaaagacaacgacgcagatactacagtatcggaaggcccacgccgacatcggggaatat
ctaaaagatcgtgtactagagcgtgcagatccccaaatggacgaaatcaacgagcacttc
caggaagatattccgccgttcatcagtgcaaagggtgccgtactgctggctagcagcgcc
ctgtccctagtgcatcgctactgccagcaaatgccatctgatgcctttggcattgtcctg
ccttggttcaagctgctcgatccaccggaaagccaaaaattgagcaaagattgtcgtaaa
tgtattgtatccatcactctgccgttgaactcaacgttacgcgaaacactctacggcgac
cccatgtcttgttcacatttagccaaggtctcggcggcatttaaagcctgtgtcaaactc
taccaattaggggaactgaacgagcgctttttgcccacaacagtaaatgaacgcgttgcc
gagatcgccaatattcacttcgagcattggaagaagtacggcgacaatgtcacctctaac
cgtagagatcgtgaagagaccaacagcagcctgaaaacctatgccatcaaatatccagag
gagttgaacgacgcgatgccgcaggtgggaacggaatgctatgcatatgaggttactatg
gaggcacactacgatcgcaacgactatacgagtcacatctacgattcactgcagacgcgc
cgcaactatgctctgctgctgaggaaacgattgccgcgcttggccgagatgccgctattc
aaccatcagggcaagatgcacgtgcatgtggccgaagagccatcaaaggtggtcatacag
accgaggagcagttggaacagcttcagcattttcatgtaatgatctttcgcgatatcctg
cgtatttggcagcccttctttgtgctcgatcgccatagtaatgagaactgtttccttgtg
gtgcctctgtcagcgacgcctggcgttggcatcgattggccactggtggagcacttccaa
cggctgccaaaggcacaagccagaagcctcgcagagcgccaccaaatgccgccaccgaat
ccacaggactatgtgggcacagttgtaacgcaatggtatgccaactatgatgagaaacgt
atgatggttactaaggtgcacacggatctgtcgcccttaagcatgatggaggaaaaacag
cagggcaagagctactatgaattcactatggcaaagtatcggaactacataggcgatgtg
gtccacaagcagcagttcctactcgaggtacgcgagctgtccgatcagctgaatttctat
gttcagcaaagggtcaaatcctcggcacagagcaaagcgcgtgccaaagtgatgcttatc
cctgagctgtgctttaatttcggctttcccggagatctgtgggtgaagctgctcttcctg
cctagcatattgcgacggttgcacttcatgctgcatgctgagacgctgcgcgttcgaatt
aatgaatacctcggactggacaagatgccacagaacggagtggattataggccgcgagca
ttggagattgattggtcgctgcgccgcaatgttgatcaccagggcaatgcgatgcatgcc
gatgattgcgaagagccgcgtccgctgctcgagccgttgcctaccaaaggagtagagaag
gcaatggaaaggctgaatataaccgatctagaggtaccctggcagcagtatatggaaccg
cgcgatattgatcgcaacgtcatgactacctatcccgtggagctttcatatttcttcaat
ttcaccaggggaaagaataactgtttcgataagatggaagacgacgacaaggagctctgg
acccagaggcagtttaaaatgtccgagggcaacatatacagctgtcaagcacgttcaaat
aagctgcccgccctaatgcccgccagcatggataatggcaaacgtgtcgagcaggtagtg
ttatctgtgctgcagcacagcatttccaatgagcatataactccggcggagcagggcgaa
tacctggcagccatcacgtatgcgggcagtgtcgacgtcttcgatatggagcgattcgag
ctgctcggcgattgctttctcaagctaagcgccactctctatttggccaacaagtatccc
gactggaatgagggcattctaacgcaggtgaagtcgacgctggtctctaatcgaaatctt
ttgtactgcctcagcgatacggacataccccatcgcatctgcagcaccctcttcacgcca
aaatacacttggctgccgccttgtgtggccttgccacagaatgtgaaggagctttggaag
gagaatccgtgcttggcagcgctggtgggaccacacaatttgcgaaatttgtccatcagc
gaggaggagctgttcggtgatggcaattgcggaaagcaatcacttagtaactttatcagc
ggctgtcaatccaatcagcattctcatcatgcgggcacggactttagcagcgaaatcaac
ttttgcttgggccaggtgcagatgcccaataaactgatcgccgacacgttggaggcgata
ttgggcgtggttgtgaagaattatggactgcatcacggcttccgtatgctggaatatttt
ggcatttgcaagccggacattggcaaaccgctcacccagttgctagaccttaaactaggt
ggctcccgcatgcgcaccaatatatcgcagcgcgaagtggatggtttcttgataaatcat
caatttttggagcaaaatttgggttatactttccgcgatcgagcctatctgctgcaagcg
ctgacacatccctcaaatccaacaaaccgtttgacgggttgctaccaggaacttgagttt
ataggcgatgccatattggatttcctcatctcagcttacatatttgaacacaaaactcgc
atgacacctggtcagttaacggatttgcgctcggctctggttaataacacgactctggct
tgcatttgtgtgcgtcatcgattccatttctttattctggcagagaatgcactgctttcg
gaatccattcagagttttgtgcagttccaggagacgcagcaccaccgcgttactaaccat
gtgcgtattctcatggaggaaaaggatgtgcagccggagcctctcgactccgatgacgaa
ttggaaatggccgagctggcggccaagcaaccaaagcaaacaattaaagacgccaattcc
ccgcaagaaggcgaatttaacatttcgcataacgtggaggtgcccaaggccctgggtgat
gtgctggaagcgcttatcgccgccgtttatctagactgccgggatttgaacaccacctgg
caagtggtctacaaaatgtttgagcccgagctactcgaattctcccgtaatgtgccactc
aatccaatccgtcagctttttgagcacaagctagcaaagcccacctttagctcgcctgtc
atggacaataaccttgtgatggtcacctgccaattcatctgcatggacaagaccatgaag
gtctatggctttggcagcaatggcaagcaggccaagctctcagctgcgaagcatgcactc
caaaaactggccaaatgcgatgtatag
DBGET
integrated database retrieval system