Desulfobacter hydrogenophilus: EYB58_05275
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Entry
EYB58_05275 CDS
T10839
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dhg Desulfobacter hydrogenophilus
Brite
KEGG Orthology (KO) [BR:
dhg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dhg03032
]
EYB58_05275 (gyrB)
03400 DNA repair and recombination proteins [BR:
dhg03400
]
EYB58_05275 (gyrB)
Enzymes [BR:
dhg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EYB58_05275 (gyrB)
DNA replication proteins [BR:
dhg03032
]
Prokaryotic type
DNA Topoisomerases
EYB58_05275 (gyrB)
DNA repair and recombination proteins [BR:
dhg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EYB58_05275 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
Toprim_4
HATPase_c_3
Nudc_N
Motif
Other DBs
NCBI-ProteinID:
QBH12372
UniProt:
A0A328FG84
LinkDB
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Position
complement(1206207..1208621)
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AA seq
804 aa
AA seq
DB search
MNKNQGNKDYGAGDIKVLEGLDAVRKRPSMYIGNVDLEGLHHLVYEVVDNCIDEAMAGYC
DTIFVTIHEDLSVSVEDNGRGIPVGMHETEHIPACEVVMTKLHAGGKFDKDAYKVSGGLH
GVGISVVNALSEHLVMEVFKDGKIYHQTYSKGHKLTELEVLGDTEKQGTLITFSPDFTIM
NKNEFSYVTLSRRIRELAFLNKGIRIVIEDERSAQKDDFHYEGGIVSFVEYLNRSCTPLH
DPIHIEGDKNDVQIEVAIQYNDTFKEKLYSFANNIRTIEGGAHVSGLKGALTRTVNAYIS
GNTSLPKNMQSIKISGDDMREGLSVIVSVKLMEPQFEGQTKTKLGNNEVKGIVESLLNEK
LGQFLEENPNVAKKIIAKGVDAARARDAAKRARELARKKGTLLDSTLPGKLAECQFADPA
ERELFLVEGDSAGGSAKQGRDRRFQAILPLKGKILNVEKARFDKILRSDEIKNIITVLGT
GAGREEYDIEKIRYHKVVIMTDADVDGSHIRTLLLTFFYRQMPDLISSGYLYIAQPPLFR
VGSRKNGIYLKNETEYADYLIRRISSQKQIVINGHDTPLTEDEFYAFLQNMTDYYNSMNQ
LHKRDYDTDLLFTLIREGVSSKRFLEEKTNLEALSAMLKEKEYTPQEIEFDQERSIYEMD
ILDNTGQTKLLRVGREILSTSDYQKMRQAYEKIKDLNQPPFSMSSRAADAKTVTTLDDLN
GLYEYLMAEAKKGINIQRYKGLGEMNADQLWETTMNPEKRIMLRVDIEDAEKADEIFTLL
MGEEVEPRRNFIQKHALEVSSLDY
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaccaagggaataaagattacggcgcaggcgacatcaaagttttagaaggc
cttgacgctgtccggaaaagaccgtccatgtacatcggcaacgtggaccttgaaggcctg
caccacctggtatatgaggtggtggacaattgtattgatgaagccatggcaggatattgt
gacacgatttttgtcaccatccacgaggatctgtcggtgagcgtagaggacaacggccgg
ggtatcccggtagggatgcacgaaaccgaacatataccggcctgcgaggtggtcatgacc
aaattgcatgccggcggcaaattcgataaagacgcctataaagtttccggcggcctgcat
ggtgtgggtatttccgttgtcaatgccctatccgagcatctggtcatggaggtgtttaaa
gacggtaaaatctatcaccagacctattccaaagggcacaaactcactgaacttgaagtc
cttggtgatacggaaaaacaggggacactgattacgttctcccctgatttcaccattatg
aataaaaacgaatttagctatgtcaccctgtcccggcgtattcgggaactggcctttttg
aacaaagggatcaggatcgtcatagaggacgaacgttctgcccaaaaggatgacttccat
tatgaaggaggaattgtctcctttgtggaatacctgaaccgatcctgcaccccgctgcac
gatcccattcatattgaaggggataaaaacgatgtccagatagaggtggccatccagtac
aatgataccttcaaggagaaattgtactcttttgccaacaatatcaggaccattgagggg
ggagcccatgtatccgggcttaaaggggccctgacccgcacggtgaatgcctatatttca
ggcaacaccagtctgcccaaaaatatgcagagcatcaagatcagcggtgatgatatgcga
gaaggcctatccgttatcgtatcggtcaaactcatggagccacagtttgaaggtcagacc
aagacaaaactgggcaacaatgaggttaagggcattgttgaatccctgctaaatgagaaa
ttgggccagtttttggaagaaaatcccaatgtcgccaaaaaaattatcgccaagggcgtg
gatgcggcccgggccagggatgcggccaaacgagccagggagcttgcccgtaaaaaaggg
acattgctcgattccacgttgccgggcaaacttgccgaatgccagtttgccgatcctgca
gagcgtgaactgttcctcgtggagggcgattctgccggcgggtctgccaaacaaggccgg
gatcggcgcttccaggccatccttcccttgaaaggcaaaattctcaatgtggaaaaggcc
cggttcgacaaaattcttcgaagcgacgagattaaaaatatcattacggtgctgggtaca
ggcgcgggcagggaagagtacgacatagagaaaatccgctaccataaggtggttatcatg
acggatgcggacgtggacggctcgcacatccggaccctgcttctcacttttttctaccgc
cagatgccggacctgatctcaagtggatacctgtatattgcccaacccccgcttttcagg
gtgggatcaaggaaaaacggcatatacctgaaaaatgaaaccgaatacgccgattatctg
attcgcagaatttcatcccagaaacagattgtgatcaatggacacgacacgcccctgacc
gaggatgaattctatgcgtttctgcaaaacatgacagattactacaacagcatgaaccag
cttcacaaacgtgattatgatacggatcttctgtttaccctgatcagggaaggggtcagt
tcaaaacgcttcctggaagaaaaaaccaacctggaagccttatccgctatgctgaaagaa
aaagaatacaccccccaggaaatcgaatttgatcaggaacgcagcatttatgaaatggat
attctggacaacacagggcagacaaaactgctgcgtgtgggaagagagattcttagcacc
agcgactaccagaaaatgcgccaggcctatgaaaaaataaaagacttgaaccagccaccc
ttctccatgtcctcaagggcggctgatgcaaaaacagtaacgacccttgatgatttaaac
ggcctttacgaatatctcatggccgaagccaaaaagggaatcaatatacagcgttataaa
ggtctgggtgaaatgaacgcggaccagctgtgggaaacaaccatgaatccggaaaagcgg
attatgctgagggtggatattgaagatgcggaaaaagctgacgagatatttaccctgctc
atgggtgaagaggtggagccccggcgcaattttatccagaagcatgcgttggaagtgtct
tccctggattattaa
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