Desulfobacter hydrogenophilus: EYB58_05315
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Entry
EYB58_05315 CDS
T10839
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dhg Desulfobacter hydrogenophilus
Brite
KEGG Orthology (KO) [BR:
dhg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dhg03009
]
EYB58_05315 (rimO)
Enzymes [BR:
dhg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EYB58_05315 (rimO)
Ribosome biogenesis [BR:
dhg03009
]
Prokaryotic type
ribosomal protein modification factors
EYB58_05315 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
DUF6917
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QBH12380
LinkDB
All DBs
Position
1216678..1218009
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AA seq
443 aa
AA seq
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MKIYLESLGCSRNQVDSEIMLGRLTAAGHQIITDPIQAETIIINTCGFISTASQEAVDVI
LEMAEFKTAGACRRLVVTGCLVQRYKDDPKLLDSLPEVDAFLGTAACDHIVKAVENAGKV
PFVLFPEPDTRQVDIPVQARELLYEKTAYIKVSEGCSRHCTYCIIPNLRGRQRSRPVELI
CKEASALLDKGVKEIILTAENTTDYGRDLDGSAFHSVLEKTAEKMAQKDPAAWLRFLYTH
PCTLDERVIETVQRHANICSYYDVPIQHAHDEVLKRMGRPYTRQDLTRLFSDIRRLDPAA
ALRTTVIVGFPGETDQQFKDLLAFIQEVEFDHLGVFTYSDSQDLPSHRLSDHIPEDLAEL
RHDAIMAAQAKISEKRNARHVDRVYPVLVEENPEDGLYIGRTPFQAPEVDGVTFIYSNGL
DTGSLVQVKITDAFEYDIAGEMV
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaagatctaccttgaaagcctggggtgttccagaaaccaggtggacagcgagatcatg
cttggccggttgactgcagccggccatcagataataacagacccgattcaggctgaaacc
atcatcataaatacctgcgggtttatttcaaccgcctcccaggaggcggttgatgttatt
ttggagatggcagaatttaagacggccggtgcgtgtcggcggctggttgtcaccggttgt
cttgtccagcggtataaggatgacccaaagcttttggacagcctgccggaggtggatgct
tttttaggcaccgcagcctgtgaccatatcgtaaaggccgtggagaatgccggtaaggtg
ccgtttgttctgtttcctgaacccgacacccgacaggtggacatccctgtgcaggcccgg
gaacttctttatgaaaaaaccgcctacatcaaggtgtccgaagggtgcagccgccactgc
acctattgcattattccaaatctgcggggtcgccagcgctcccggcccgttgaactgatc
tgcaaggaggcttctgcccttctggataagggcgttaaagagatcattctcacagcggaa
aacaccacggattacggccgggacctggacggatcggcctttcattcggtgcttgaaaaa
accgcggaaaaaatggctcaaaaagatccagccgcatggcttcgattcctgtatacccat
ccatgcacccttgatgaacgggtcattgaaacggtgcaacgccatgccaacatctgttct
tactatgatgtacccatccagcatgcccatgatgaggtcctgaaacgcatgggccggccc
tacacccggcaggatcttacccggcttttttccgatattcgccgcctggacccggctgcc
gcgttaagaaccaccgtaattgtcggcttccccggtgaaacagaccagcagttcaaggac
cttttggcatttatacaggaggtagaatttgatcatctgggtgtttttacctattccgac
tcccaggatctgccttctcacaggttaagcgatcatatccctgaagacctggcagaatta
cggcatgatgccattatggcggcccaggcgaagatttccgaaaaacgcaatgcccggcat
gtggatcgtgtctatccggttcttgtggaagaaaaccccgaagacgggttatacatcggc
agaaccccgttccaggcccctgaagtggacggggtaacatttatttattcgaatggactg
gacacaggcagtctggttcaggtaaaaataaccgacgcatttgaatatgatattgccggg
gagatggtgtga
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