Desulfobacter hydrogenophilus: EYB58_05720
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Entry
EYB58_05720 CDS
T10839
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
dhg Desulfobacter hydrogenophilus
Pathway
dhg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dhg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EYB58_05720 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dhg03400
]
EYB58_05720 (uvrA)
DNA repair and recombination proteins [BR:
dhg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EYB58_05720 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EYB58_05720 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
RsgA_GTPase
AAA_29
nSTAND1
AAA_16
AAA_21
AAA_22
nSTAND3
Viral_helicase1
SLFN-g3_helicase
BCA_ABC_TP_C
DnaJ_CXXCXGXG
cobW
MMR_HSR1
AAA_15
Mtrc-MtrF_II-IV_dom
PknG_rubred
DUF3097_C
Motif
Other DBs
NCBI-ProteinID:
QBH12451
LinkDB
All DBs
Position
complement(1312803..1315778)
Genome browser
AA seq
991 aa
AA seq
DB search
MKKNIAAAVTQTADSYAADSLTPLHPIEDDSRSKELDRIIVRGAKEHNLKNIDVEIPKKK
LVVVTGVSGSGKSSLAFDTIFAEGQRRYVESLSSYARQFIGQMEKPRYETIRGLSPTIAI
EQKAASKNPRSTVGTITEIYDYLRVLFARVGTQYCYKCGKKVGRGHAQAMVSQIMDLPDG
SKILILAPIVENRKGEHRERLEDLKREGYARVRVDGVVQDLENVQTLARNKKHHIEVVID
RLVVKSEGAFEKRLTDSVEAALKLGAGQLIVHMVGREDLKMSEARSCCGIAYPELTPQIF
SFNSPLGMCPDCNGIGTLLAIDPDKVVPDTNLSIREGAVVPWKNYFIKKPRFNNENSWGK
GQLLAMEEQWGIDFDIPWKKLPKKQRDLLLYGSDSKQMTVNWNSSKIQGSFSRTHEGLIH
TLMRRYRNTQSEHQKKYYTNFMTSAICPACKGRRLRDEILHVKINDNSIMDVTEMTVKEA
YNFISSLELTGSKKLIAAELLKEIRDRLGFLVNVGLDYLSLDRSGPTLSGGESQRIRLAS
QVGSELTGVLYILDEPSIGLHQRDNIKLLSTLKHLRDIGNTLLIVEHDQETMEASDWIVD
IGPGAGHLGGEIVAQGTPEQIRRNPVSLTGQFLSGRETIAVPEKRRMPKTMGNKWITIHG
AGENNLADITAKIPVGLLTAVTGVSGAGKSTLINQILYPALAVKLHGSQMSVGKHKKITG
LSHINKIINIDQKPIGRTPRSNPATYTKLFDPIRDLFAMLPESQSRGYKKGRYSFNVKGG
RCEACHGDGYIKVEMHFLADVFVPCDVCHGKRFNKSTLEIKYKDHSISDVLDLSVVQARE
LFDAHTKITRILDTLVDVGLSYIKLGQAATTLSGGEAQRIKLARELARKDTGDTLYILDE
PTTGLHFQDIRMLLQVLQRLTHAGNTVVIIEHNLDVIKTADWILDIGPEGGSGGGRIVAA
GPPEDVVKDSGSYTGRYLIPILNPGGHNPVS
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaatattgctgccgctgtaacccagacagctgatagttatgctgctgatagc
ctgacccccctgcaccccatagaagatgattccaggtccaaggaattggaccggatcatt
gtccggggcgccaaggaacacaaccttaaaaatattgatgtggagatccccaaaaaaaag
ctggtggtggtgacgggggtttccgggtcgggcaagtccagcctggcctttgatactatt
tttgccgaaggccagcgccggtatgtggaatccctgtcctcctatgcccgccagttcatc
gggcagatggaaaaaccgcggtacgagaccatccgggggctatcccccaccattgcaatt
gaacagaaggccgcgtccaaaaatccacgctccaccgtggggaccatcaccgaaatttac
gattacctgcgggtgctttttgcccgggtgggaacccagtactgctataaatgcggaaaa
aaggtgggacggggtcatgcccaggccatggtctcccagattatggatttgcctgacggg
tctaagatcctgattttagcgcccattgtggaaaaccggaaaggtgaacaccgggagcgc
cttgaagacctcaaacgcgaggggtatgcaagggtccgggtggacggggtggtccaggac
cttgaaaatgtccagaccctggcccggaacaaaaagcaccacattgaggtggttattgac
cggttggtggtaaagtccgaaggcgcgtttgaaaaacggcttaccgattcggtggaagcg
gccttgaaactgggcgcaggccaactcattgttcacatggtgggcagagaagatctgaaa
atgagtgaggcccgctcctgttgcggcattgcctatcccgaacttacaccccagattttt
tcctttaactcgcctttgggcatgtgtccggactgcaacggaattggcacccttttggcc
attgatccggataaagtggtgccggataccaatctatccattcgcgagggtgcggtggtc
ccctggaaaaattatttcatcaaaaaaccgcggtttaacaatgaaaattcctggggcaag
ggccagcttctggccatggaggaacagtggggtattgattttgatattccctggaaaaag
ctgcctaaaaaacagcgggacctgttactctatggctcggacagcaaacaaatgaccgta
aactggaactcgtcaaagatccagggcagtttttccagaacccacgaaggcctgatccac
accctgatgcgccggtacagaaatacccagtccgaacaccagaaaaagtactataccaat
ttcatgacgtcggctatctgcccagcatgcaaaggccggcggctgcgggatgaaattctg
catgtcaaaattaatgacaactccattatggatgtcactgagatgaccgtgaaagaggct
tataattttatctcttcccttgagctgaccggcagcaaaaagctcattgccgccgaattg
ctcaaagagattcgggatcgtctggggtttctggtgaacgtcggcctggattatctttcc
ctggacaggtccggtcccacactgtccggcggggaatcccaacgcatccgcctggcctcc
caggtggggtctgaactgaccggggtgctttatattttggatgagccctccatcggcctt
caccagagagacaacatcaagttgctgtccacactgaaacacctgcgggacatcggcaac
accctgctcattgtggagcatgaccaggagaccatggaggcctcggactggattgtggac
atcggcccgggtgccggtcacctgggcggggaaattgtggcccagggcacacctgaacag
attcgcagaaacccggtttccctcaccggtcaatttttaagcggacgtgaaaccattgcc
gtacctgaaaaacgaagaatgcccaaaaccatgggaaataaatggatcaccatccacgga
gcaggtgaaaataatctggccgacatcaccgccaaaattcctgtggggcttttaacggcg
gtcaccggtgtgtccggggcaggtaaatccaccctgatcaaccagattctctatccggcc
ctggcggtaaaactgcacggctcccagatgagcgtgggaaaacacaaaaagatcaccgga
ctgtcccatatcaacaagatcatcaacatagaccagaaacccatcggtcggaccccgcgc
agcaatcctgccacatataccaagctgtttgaccccatccgggatctgtttgccatgctg
ccggaatcccagtcccgggggtataaaaaaggacggtattcctttaatgtcaagggcggc
cgctgcgaggcctgccatggggacggatacatcaaggtggagatgcactttttggctgac
gtatttgtgccctgtgacgtatgccacggcaaacggttcaataaatccaccctggagatc
aagtacaaggaccactccatttccgatgtgttggatctgtccgtagtacaggccagggaa
ctgtttgacgcccataccaagattacccgaattctggatacgctggtggatgtggggctc
tcctatattaaactgggccaggccgccaccactttgtccggcggcgaagcccagcggatt
aaactggcccgggagcttgccagaaaggacaccggtgacaccctttatattttggacgag
cccaccaccgggctgcacttccaggacatccgcatgctgctgcaggtactccagcgactc
acccatgccggtaataccgtggttatcattgagcataacctggatgtaattaagacagca
gactggattctggacattggtcccgagggcggcagcggcgggggcaggattgtggcagca
gggccgccggaggatgtggttaaagattccggcagctacactggtcggtatttaatcccc
attcttaaccccggcggtcacaatccggtttcataa
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