Desulfobacter hydrogenophilus: EYB58_09485
Help
Entry
EYB58_09485 CDS
T10839
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
dhg Desulfobacter hydrogenophilus
Pathway
dhg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dhg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EYB58_09485 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dhg03400
]
EYB58_09485 (uvrC)
DNA repair and recombination proteins [BR:
dhg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EYB58_09485 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UvrC_RNaseH
GIY-YIG
HHH_5
UVR
HHH
HHH_2
DUF6978
DUF7508
5_3_exonuc
GPP34
GIY_YIG_2
DUF6912
Motif
Other DBs
NCBI-ProteinID:
QBH13130
LinkDB
All DBs
Position
2157614..2159452
Genome browser
AA seq
612 aa
AA seq
DB search
MISEKIKEKYDQAPHAPGVYLMRDKKGKILYVGKAKDLKKRLASYFVRKDQPEPKTAALL
ALVADFDLVVTQSDQEAFILESNLIKKESPKYNVLLKDGKNYPLLRIDMNEPYPSIQRVR
RIEKDKALYFGPYSSSKSVNQTLKQIQRIFKLRKCRDAQFKNRSRPCLNYQIKACLGLCC
NEVDPVEYQARVKDAVLFLRGRTREVIKKLRLEMAEYSAAQAFEKAAQARDTIFAVERIM
ERQVVVCADGQDRDVLGLAWKRDRAVVTVMQVRSGHLINTTYYPLDLGFKDPDEVLAAFV
TQYYEKAAQIPGFVLFSHPSDDMDRAEARLNEVADHRVHFHSPIRGEKKRLGDMARLNAK
AELEKILSREEEARAGLTMLQHLLGMDRPPERMECFDNSNLQGKDPVAAMVVFSGGRPDK
NAYRKFIIKDIDHQDDYAYMTHVLSRRFRHDREDMPLPDLLVVDGGKGQLSMAVSVVMEL
GLEGMFTLAGLAKKDADKGEKADKVYLPGRSNPLNTAQSAKALFLLEQIRDEAHRSAITF
QRSRREKRGKLSVLDGIAGIGPKKKKLLLTTFKGIDNIRKQSPETLASLPGITPAMAENL
LQVLSELKFPEN
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgagaaaataaaagaaaaatacgaccaggctccccatgcccccggggtttat
ctcatgcgggacaaaaagggaaagattctttatgtgggcaaggccaaggatttaaaaaag
cggctggcctcatattttgtaagaaaggatcagcctgagcccaagaccgcagcgcttctg
gccctggtggctgattttgatctggtcgtcacccagtccgatcaggaggcctttatcctg
gaatccaacctgatcaaaaaagaatcccctaaatataatgttcttcttaaagacggcaaa
aactatccattgctgcgcattgacatgaatgagccctatccttccatccagcgggtacga
cgcattgagaaggataaagccttgtatttcgggccgtattcttcctccaagagtgtgaac
caaacgttaaagcagatccagcggatttttaaacttcgaaagtgccgggacgcccagttt
aaaaatcggtcccggccctgtctgaattatcagatcaaggcatgcctggggctttgctgc
aatgaggtggaccccgtggaatatcaggccagggttaaggatgcagttttgtttcttagg
gggcggacccgggaggtgatcaaaaaactgcgccttgagatggcggaatattcagctgcc
caggcttttgaaaaggccgcccaggcccgggataccatctttgccgtggaacggatcatg
gagcgccaggtggtggtgtgtgcggacggacaggaccgggatgtgctcggacttgcctgg
aagcgggatcgggctgtggtgaccgtgatgcaggtaaggtccggacatctgataaacacg
acctattaccctttggacctgggatttaaggacccggatgaggttttggccgcctttgtg
acccagtattatgagaaagccgctcagattccgggattcgttctgttcagccatccatct
gatgacatggaccgggccgaagcccggctcaatgaagtggctgatcaccgggttcatttt
cattctccgattcgcggagaaaagaaacggcttggggacatggcccggcttaacgcaaag
gcagagcttgaaaaaattttatccagggaggaggaggcccgggcagggcttaccatgctt
cagcaccttctgggtatggaccggccgcccgaacgtatggagtgttttgacaactccaat
ctccagggaaaagatcccgtcgcagcgatggtggtattctccggcggcaggcctgataaa
aatgcttaccgtaaatttattataaaggatattgaccaccaggatgactatgcctatatg
acccatgttctttctcgccgattccggcacgatcgggaagatatgcccctgccggatttg
ctggtggtggacggaggaaaagggcagttgtccatggccgtgagtgtagttatggaattg
gggctggaagggatgtttaccctggcaggcctggccaaaaaggatgcggacaagggcgag
aaagcagataaggtctacctgcccgggcggtccaatccgttgaatacggcccagtctgcc
aaggcgctttttcttctagagcagattcgggacgaggcccacagatctgccattaccttc
cagcgctcccgcagggaaaaacggggaaaactgtccgtccttgacggtatcgccggtatt
ggacctaaaaaaaagaagctgctgctcaccacctttaaaggtattgataatatccgaaaa
cagtcgccggagacgcttgcctcgcttcccggcattacgccggcaatggcagagaatttg
ctccaggtgttgtctgaactgaagtttcctgaaaattag
DBGET
integrated database retrieval system
