Desulfobacter hydrogenophilus: EYB58_11420
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Entry
EYB58_11420 CDS
T10839
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
dhg Desulfobacter hydrogenophilus
Pathway
dhg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dhg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EYB58_11420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
dhg02022
]
EYB58_11420
02035 Bacterial motility proteins [BR:
dhg02035
]
EYB58_11420
Two-component system [BR:
dhg02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
EYB58_11420
Bacterial motility proteins [BR:
dhg02035
]
Pilus system
Twitching motility proteins
EYB58_11420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
PDE8A_N
AAA
AAA_2
CoA_binding_2
AAA_16
AAA_22
HTH_30
AAA_19
cREC_REC
nSTAND3
DUF815
DUF7395
VpsR
DUF6470
Motif
Other DBs
NCBI-ProteinID:
QBH13480
UniProt:
A0A328FGI9
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All DBs
Position
2576594..2578015
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AA seq
473 aa
AA seq
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MADAHRILVVDDELSMRQFLEMLLSKKGYKVNLAKNGKQALSSIKQRKYDLVLTDIRLGD
ITGLDVLRAVKKEHPDTVVIMISAYATTEIAVEAMNEGAYDFVPKPFDNNELCATIAKAL
ALLTLDQEKALRSSELKSHLHFNRIIGNSPGMQAIYQRIRQIGPTKTNVLVTGESGTGKE
LIARAIHDNSERKDRPFVVVNCGGIPDTLMESEFFGHVKGSFTGAVADKPGLFEAADTGT
IFLDEIGELSMFLQVKLLRAVQETRFKPVGGTREIDVDVRIISATNKKLEQEVIDGNFRE
DLFFRLNVIPIKVPPLRDRKGDVDLLAAHFVEKYSKKLGKDIVKLSSYAIDFLNQYSFPG
NVRELENLIERSVALSATNIILPESLTISSHKRRRWIEGVKDNRYDLEDVVSGVDLDKIM
SDIEGAYVKKAVEISQGNKSKAAELLNLSLRSFRYRLDKTIPVKNESGDSDAG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgcacaccgcattctggtggtagacgatgaactgagcatgcgccagttcctg
gagatgcttctgtccaaaaaagggtataaagtcaatcttgccaaaaatggcaaacaggcc
ttaagcagcattaagcagagaaaatacgatctggtgctcaccgatatccgtttaggcgat
attacaggcctggatgtgttgcgggccgtgaaaaaagagcatccggacactgtggtaatc
atgatctccgcctatgccacaacggaaatcgctgtggaggcaatgaacgaaggggcttac
gattttgtgcccaagccctttgacaacaatgagctttgcgccaccatcgccaaggccctg
gcacttttgaccctggaccaggaaaaagcacttcgttcgtctgagcttaaatcccatctt
cattttaaccgaatcatcggcaatagtcccggcatgcaggcaatttatcagcgaattcgc
cagattggccccaccaagaccaatgtgctggtcaccggtgaaagcggtaccggaaaggag
ctcatcgcccgggccatccacgataattccgagcgtaaagacaggccctttgtggtggtc
aactgcggcggaatcccggatacgctcatggaaagcgaatttttcggtcatgtcaaaggt
tcgtttacaggggctgtggctgacaagccgggattgtttgaggctgccgataccggcact
atttttctggatgaaatcggcgagttgtccatgtttctgcaggtaaagctcttgcgggcc
gtccaggaaacccggttcaagcctgtgggcggtacccgggaaattgatgtggatgtcagg
attatctctgccaccaataaaaagctggagcaggaggtcatagacggcaatttcagggaa
gatttatttttccgccttaacgtaatccccattaaggtgccgccgctgcgggatagaaaa
ggggatgttgacttacttgcggcccatttcgtggaaaaatattcgaaaaaactgggcaag
gatatcgtaaagctgtcgtcctatgccattgattttttgaaccagtactccttccccggc
aatgtcagggagcttgaaaatctgatcgagcggtctgtggccctttccgcaaccaatatt
attctgcccgaaagcctgaccatctcttctcacaaacggcggcgctggatagaaggcgtt
aaagataaccgctatgatctggaagatgtggtttccggcgtggatttggacaagattatg
tccgacattgaaggtgcatatgtcaaaaaagccgtggaaatatcccagggcaacaagagt
aaagcagccgaacttttaaatttaagcttaaggtctttcaggtatcgcctggacaaaacc
ataccggtcaaaaatgaatccggggatagtgatgccgggtaa
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