Desulfobacter hydrogenophilus: EYB58_14130
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Entry
EYB58_14130 CDS
T10839
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dhg Desulfobacter hydrogenophilus
Brite
KEGG Orthology (KO) [BR:
dhg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dhg03032
]
EYB58_14130 (topA)
03400 DNA repair and recombination proteins [BR:
dhg03400
]
EYB58_14130 (topA)
Enzymes [BR:
dhg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EYB58_14130 (topA)
DNA replication proteins [BR:
dhg03032
]
Prokaryotic type
DNA Topoisomerases
EYB58_14130 (topA)
DNA repair and recombination proteins [BR:
dhg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EYB58_14130 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_8
Toprim_4
Lar_restr_allev
Zn_ribbon_NUD
DNA_ligase_ZBD
Toprim_2
DUF1655
Motif
Other DBs
NCBI-ProteinID:
QBH13964
LinkDB
All DBs
Position
complement(3183765..3186062)
Genome browser
AA seq
765 aa
AA seq
DB search
MAKPLIIVESPTKIKTLKKYIGKDYNVAASAGHIRDLPVKNLGIDVDDNFKAKYVNIKDK
SKVISNLKKTAGDTDEIFLAPDPDREGEAIAFHIMDILKKKDRKFHRVLIHELTKKGIAD
ALSHPTQPDVDKYDAQQARRKLDRLVGYQISPLLWQKVQRGLSAGRVQSVAVKIICDRER
EIRVFKPEEYWTITADLEAANPPIFNAALIKISGKKTKVTNAEQAHAIVADLEKANFIVR
EIKNKTIKRNPLPPFITSKLQQDAINRLRFSAKKTMVVAQQLYEGIEIGSGGPDGLITYM
RTDSTRIAPEAAEEALGLIRKSYGDEYALDAPRFFKNKNKAQDAHEAIRPTSVYNTPENL
KSFLSPDQFKLYDLIWKRFVASQMNQALIDQKSILIEATEKYLFSVSGSTTRFDGFMRLY
ATQEKSSEKDIQSLPPVEPKEQLATRKINPDQHFTKPPPRFSEASLVKELEKNGIGRPST
YASIIAVIQDKGYVDLIKRYFTPSELGFIVNDLLVRAFPDLLDISFTAQMETNLDDVEQG
KLNEVDLLKAFYSDFKTTLDNAKDDMVSVKGVGIETDIKCPLCGKPVNIKIGRNGHFLAC
TGYPECSFTSNYTRDEKGNIEIVEKIQDSEPVKDCPKCGKPMVQKDGRFGLFIACTGYPE
CKHTESVAQENSSKDTGVPCPEKGCDGTIVEKHSKRGKIFYGCSKYPDCTFATWDKPVNE
SCPDCGSPYLLEKETKRDGKIHKCPDRSCGFKKSVLPIPEKEEPV
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaagccgcttatcattgtcgaatcgccaaccaaaatcaaaaccctgaaaaaatat
atcggaaaggactataatgtggcggccagtgccggccacatccgcgaccttccggtaaaa
aacctggggattgatgtggacgacaattttaaggccaaatatgtcaatataaaagataaa
tccaaggtcatttccaatctgaaaaaaactgccggtgacacggatgaaatattccttgcc
cctgacccggatcgtgaaggggaagccattgcctttcatatcatggatattctgaaaaaa
aaggatcgcaaattccaccgggttcttatccatgaattaacaaaaaaaggtattgccgat
gccctttcccatccaacacaaccggatgtggacaagtatgacgcccaacaggccagaaga
aaactggaccggctagtgggctaccagatatcaccgcttttatggcaaaaggtccaaaga
ggactcagtgccggtcgagttcagtccgtggccgttaaaatcatctgtgacagggagcgg
gaaatccgggtgtttaagccggaagaatactggacgattaccgcggatcttgaggcggca
aatccgccgattttcaatgcggcattgataaaaatatccggcaaaaaaaccaaggtcacc
aatgcggaacaggcccatgccattgtggcagaccttgaaaaggccaatttcatcgttcgg
gaaatcaaaaacaaaaccatcaagcgcaatccgttaccgccttttatcaccagtaaactc
cagcaggatgccattaaccggcttcgcttttccgcaaaaaaaaccatggttgttgcccag
cagctatatgaaggcattgagattggcagcggtggaccagacggtctgatcacttacatg
cgtaccgattccacccgtattgctccggaagcggccgaggaggctttaggcctgatccgc
aaatcctatggagacgaatatgctctggatgcgcccagattttttaaaaacaaaaacaag
gcccaggatgcccatgaagccatccgtcccacatcggtttacaatactcctgaaaacctt
aaatcctttctgtcacccgaccagttcaaactctatgatctgatatggaaacgatttgtg
gcctcccagatgaatcaggccctgatcgaccagaaatccatcctaattgaggcaacagaa
aaatacctgttttccgtttccggatctacgacccgttttgacggattcatgcggttgtat
gcaacccaggaaaaaagcagtgaaaaagatatacagtccctgccgccggtggaacccaag
gaacagctggcaactcgtaaaatcaatccagaccagcattttaccaagcccccacccaga
ttttccgaagcatcccttgtcaaagagcttgaaaaaaacggcatcggcaggccatccacc
tatgcatccatcatagccgtgatccaggataaaggatatgtggatctgatcaaacggtat
ttcacccccagcgagcttggctttattgtcaatgatcttctagtccgtgcatttcccgac
cttttagacatttcattcacggcccagatggagaccaatcttgatgatgtggaacaggga
aaactcaacgaagttgacctgttaaaagcattttattccgattttaaaaccaccctggat
aacgccaaggacgatatggtttccgtcaaaggcgtaggcattgaaaccgatattaaatgt
cctttatgcggaaaacccgttaatatcaaaatcggcagaaacggacattttctggcctgt
acgggatatcccgagtgcagctttaccagtaactacacaagggatgaaaaaggcaatatt
gaaattgttgaaaaaatccaggatagcgaaccggtaaaggactgtcctaaatgcggcaaa
cccatggtacaaaaagatggtcgatttggattgttcatcgcctgtaccggatatcccgaa
tgcaaacacacggaatcggttgcccaggaaaactcaagtaaagatacaggcgtaccctgc
ccggaaaaaggatgtgacggcacaatcgtggaaaagcactcaaaacggggaaaaatattc
tacgggtgttccaaatatccggattgtacctttgccacctgggacaaaccggtcaacgag
agctgtccggattgcggcagcccctatctactggaaaaagagacaaagcgggatggtaaa
atacacaaatgcccggaccgttcatgcgggtttaaaaaaagtgttttgcctattccggaa
aaagaagagcctgtttaa
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