Desulfobacter hydrogenophilus: EYB58_18545
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Entry
EYB58_18545 CDS
T10839
Name
(GenBank) 3'-5' exonuclease
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
dhg Desulfobacter hydrogenophilus
Pathway
dhg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dhg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EYB58_18545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dhg03400
]
EYB58_18545
DNA repair and recombination proteins [BR:
dhg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
EYB58_18545
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
QSregVF_b
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
QBH14739
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All DBs
Position
4181139..4181822
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AA seq
227 aa
AA seq
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MFIFLDTETTGTAEKDRLCQLAYKTETGEIVNELFKPPLPIAIDAMCVHHITNEMVEDKP
AFKDSPDCQKLAGLLSDGSNVLVAHNAKFDVDMLIKEGINPKKVVCSLKLARNLDPEGKI
PKYNLQYLRYFLKINIQATAHDALGDILILEKLFERLLARMNKDFGPEAVENKMIEISSN
PVLLSRMYFGKHKGQFFRDIPKDYLQWLSGTDLDEDMRFTVEHHLMM
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
ttgtttatattccttgatactgaaacaactggaactgcagaaaaagacaggttatgtcag
cttgcgtataagacggaaaccggcgagattgttaatgaactattcaaaccgccgttgcca
attgcaattgatgccatgtgtgttcatcacattacaaatgagatggttgaagacaaacca
gcgtttaaggatagccctgattgtcaaaaattagctggtttattgagtgatggttcgaat
gttcttgttgcacacaatgccaaatttgatgttgatatgcttatcaaggaaggtatcaat
cctaaaaaggttgtctgttctttaaagctcgccaggaacctggaccctgaagggaaaata
cccaagtacaaccttcaatatttgagatatttcttgaaaatcaacattcaggcaactgct
catgatgctctgggtgatattctgattcttgaaaaattgtttgagcgattactggcaagg
atgaacaaagattttgggccagaggctgtcgaaaataaaatgatagaaatttcgagtaac
cctgtattattgagcaggatgtatttcggaaaacacaaagggcagttttttagggacatt
ccgaaggattatttgcaatggttatccggcacagatttagatgaggatatgcggttcacg
gtcgaacatcatctgatgatgtaa
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