Desulfobacter hydrogenophilus: EYB58_18995
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Entry
EYB58_18995 CDS
T10839
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
dhg Desulfobacter hydrogenophilus
Brite
KEGG Orthology (KO) [BR:
dhg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dhg03036
]
EYB58_18995 (xerD)
Chromosome and associated proteins [BR:
dhg03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
EYB58_18995 (xerD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_5
Phage_int_SAM_4
Phage_int_SAM_6
DUF3435
Motif
Other DBs
NCBI-ProteinID:
QBH14817
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All DBs
Position
complement(4271146..4272033)
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AA seq
295 aa
AA seq
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MHELVDTYMDHLTIEKGLSANSITAYGTDLASYINYLSDNGIETLDNADTTAILGWLVYL
TRQGLSAKSRARHLISIRGFYKYLTAEKLISVNPLKDIDIPKTGRHLPGVISVNEVEALL
NACDITTPKGQRNLAMMEIMYGAGLRVSELVFLKVVDVNLDAGLVRVMGKGAKERIVPIG
SKAKDVVRIWLDQGRPTTLKQLSSDFLFIARAGKPMTRQSFWKIIKKYALVAGIVRPVSP
HTLRHSFATHLIEGGADLRSVQTMLGHSDISSTQIYTHISRDYLIKMHHEFHPRK
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaactggtagacacatatatggatcatctgaccatagaaaaaggcctttctgct
aacagcattacagcctatggaacagatttagcctcatatatcaattatctgtctgacaac
gggattgaaactcttgataatgccgacaccacggccattcttggatggctggtttatctg
acccgtcaggggctgtcagctaaatccagggccaggcacctgatctccatcaggggattt
tataaatacctgacagcagagaaattgatatccgtcaatcccctaaaagatattgatatt
cccaaaaccggccggcatttgccgggtgtcatctccgtcaatgaggtggaagcgctttta
aacgcctgtgatatcacaacacccaaagggcaaagaaatcttgccatgatggaaatcatg
tacggggccggactccgggtctcagagcttgtatttttaaaggtggttgacgtaaatctg
gatgcaggtcttgtcagggtcatgggcaaaggcgccaaagagagaattgtacccattggt
tcaaaggccaaagatgtggtaagaatttggctggatcaggggcgtcccacgacattaaag
cagttatccagtgattttttgtttattgcgagggcaggcaagcccatgacccgtcaatca
ttctggaaaattataaaaaaatacgcccttgtggccggtattgtccggcctgtctccccc
cataccctgcgccactcctttgccacccacctgatcgagggtggggcggacctgcggtcg
gtccagaccatgctcggtcattccgatatttcaagcacccagatttacacccatatctca
cgcgattacctgattaaaatgcatcatgaatttcatcctagaaaataa
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