KEGG   Desulfobacter hydrogenophilus: EYB58_19215
Entry
EYB58_19215       CDS       T10839                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
dhg  Desulfobacter hydrogenophilus
Pathway
dhg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dhg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    EYB58_19215 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dhg03400]
    EYB58_19215 (uvrA)
DNA repair and recombination proteins [BR:dhg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EYB58_19215 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      EYB58_19215 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 RsgA_GTPase AAA_16 nSTAND1 AAA_15 AAA_33 AAA_23 DnaJ_CXXCXGXG AAA_25 BCA_ABC_TP_C NMD3
Other DBs
NCBI-ProteinID: QBH14860
LinkDB
Position
4315761..4318586
AA seq 941 aa
MPIDHIIIKGARTHNLKNIDVSIPKNSLTVVTGLSGSGKSTLAFDTLYAEGQRRYVESLS
TYARQFLGQMDKPDVDAIEGLSPAIAIEQKTASHNPRSTVGTVTEIYDYLRLLFARAGRS
HCHICGKPISSASIDQIIQSILFPMPEKAQKIMVLAPVVTNKKGGHEKLIHHLKKEGFAR
LKIDGHVCLIEDAPALDKKKAHAIDVVVDRLILKQGIEQRLTDSVEAALALAQGQVVIDN
LDLKTQTLFSEKSTCHTCGISYPQFSPASFSFNSPQGACPHCDGLGYLREFDPAKIVANH
HLSLRQGAVLPWAGKDSVRHMEFLDALVTHYNEDIYTPFKDLSTTFQKVILFGSGTHKIP
FYVEQADKKIVYEKTFDGVIQQLAHRFQETKSASVRQNLGKYMGQKVCSKCNGSRLNSGA
SAVQVADKTIHQITAMSVKQADDFINSLHLTGREKAVSKSILTELSQRLSFLEDVGLDYL
TLDRSAATLSGGESQRIRLATQIGSKLSGVLYVLDEPSIGLHQRDNARLLSTLMHLKDLG
NTVLVVEHDEETMLAADHIVDVGPKAGVNGGQVMFSGPPEELVKASCLTGLYLSGKRNIP
VPETRRTGTKTFLTVQKASENNLKDIDVSFPIGCLTCVTGVSGSGKSTLVLSTLYQALAS
TINKSEKPVGKHAAISGMEYIDRVIHIDQSPIGKTPRSNPGTYTGVLTHIRELFAQTPEA
KARGYKAGRFSFNIKGGRCESCQGDGIIKIEMHFLPDVYVTCDVCNGMQFNKETLEIKFK
GKNIAQVLDMTVNQALKFFDNISSIRHTLSTLVETGLGYIKLGQAATTLSGGEAQRIKIA
RELSKKSTGKTIYILDEPTTGLHTDDIKKLLAVLNRLVDAGNTVVVIEHHLDVIKCADYV
IDLGPEGGDQGGQIIAEGTPEQVASTPLSHTGFYLNRVLAN
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgccaattgaccacatcataattaaaggcgccagaacccataaccttaaaaatattgat
gtcagtatccccaaaaatagcctgaccgtggtcaccggactttcaggttccggtaaatcc
accctggcctttgacacgctttatgccgaaggccagagacgctacgttgaatctttatcc
acctatgcccgccagtttttaggccagatggataaaccggatgtagatgccatagagggg
ctgtctcctgccattgccattgaacaaaaaaccgcctcccacaaccccagatctacggtg
ggaaccgtcacggaaatctatgattacctgcgcctgctttttgccagggccggcaggtcc
cactgccatatctgcggtaaacccatttcatctgcatccatcgaccagatcatacagagc
atcctttttccaatgccagaaaaagcacagaaaataatggtgctggcccctgtggtcaca
aacaaaaaaggcgggcacgaaaaacttatccatcatctgaaaaaggaaggatttgcaagg
cttaaaatagacgggcatgtctgcttaattgaagatgcaccggcacttgataagaaaaaa
gcacatgccatagatgttgtggtggaccggctgattttaaaacaggggatcgaacaacga
ctaaccgattccgttgaagccgcactggcccttgcccaaggtcaggtggtcattgataat
ctggatctaaaaacacagactcttttcagtgaaaaatccacctgccacacctgcggcatc
tcttatccgcaattttctcccgccagcttttcatttaattccccccagggtgcatgtccc
cattgtgatggtcttggttatttaagggagtttgatccggccaaaattgtcgcgaaccat
cacttgtccctgcgccagggagcggtattaccctgggccggaaaggattccgtacgtcat
atggaatttttagacgccctagtgacccattataatgaagatatctacacaccttttaaa
gacctttccacaacctttcaaaaagttattctctttgggtccggcacccataaaattcct
ttttatgttgaacaagccgacaaaaaaatcgtttatgaaaagacatttgacggcgtaatt
caacaacttgcccaccgtttccaggagacaaaatcagcatctgtcagacaaaaccttggc
aaatacatgggccagaaagtctgctctaagtgtaatggttcccgcctgaattccggcgct
tcggcagtacaggtggcagataaaaccatccaccagatcacggccatgtccgttaagcag
gcagatgattttataaacagccttcatttgacaggcagggaaaaagccgtatctaaatcc
attcttacagaattgtcccaaaggctttcttttcttgaagatgtgggccttgactatctg
acccttgaccgctccgcagcaaccctttcaggcggagaaagtcagcgcatccggctggcc
acccagataggttcaaaactttccggagtcctttatgtgcttgatgaacccagcataggt
ctacaccaacgggacaatgcccgcctgctcagtacgctgatgcatctaaaggacctgggc
aataccgtactggtggtggaacatgatgaagaaaccatgctggccgcagatcacattgtt
gatgtgggtccaaaggcaggtgttaacggtggtcaggtgatgttttcaggtccgcccgaa
gaactggtcaaagcatcctgtctcactgggctgtatctttccggaaaacgaaacattcct
gtaccggagaccaggcgaaccggcaccaaaacatttttaacggtccaaaaggcaagtgaa
aacaaccttaaggatattgatgtctcctttcccatagggtgtttaacctgtgtaacaggc
gtatcaggatcaggaaaatcgaccctggttctgtcaaccctttaccaggcccttgcaagc
accattaacaaatctgaaaaacccgtgggaaaacatgccgccatttcaggcatggaatat
atcgacagggttatccatattgatcagtcccccatcggcaaaaccccgagatccaatcca
ggcacctatactggggttctcacccatataagagaattatttgcacagacgcccgaggca
aaggcccggggctacaaggccgggcggttcagttttaatatcaagggcggcagatgcgaa
tcctgccaaggagacggcatcatcaaaattgaaatgcattttctgcctgacgtttatgtc
acctgtgatgtgtgcaacggcatgcaattcaacaaagaaacccttgaaataaagttcaaa
ggaaaaaacatagcccaggttctggatatgaccgtcaatcaggcccttaaattttttgac
aatatatcatcaattcggcacaccctttccacgttagtggaaacagggttgggatatatc
aaactgggccaggcggccacaacactatctggcggggaagcccagcgtataaaaattgcc
agggagctgtccaagaaaagcacgggaaaaaccatttacattctcgatgaacccaccaca
ggcctgcataccgatgatatcaaaaagctattggccgtgctgaacagacttgtggatgca
ggcaacaccgtggtggttattgaacaccaccttgatgtcattaaatgcgcggattatgtc
attgatcttggccctgaaggtggagaccagggtgggcagatcatcgctgaaggcaccccg
gaacaagtggcctctacaccgttgtcccatacgggcttttacctgaaccgggttttggca
aattag

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