Desulfobacter hydrogenophilus: EYB58_19585
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Entry
EYB58_19585 CDS
T10839
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
dhg Desulfobacter hydrogenophilus
Pathway
dhg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dhg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EYB58_19585 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dhg03400
]
EYB58_19585 (recB)
Enzymes [BR:
dhg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EYB58_19585 (recB)
DNA repair and recombination proteins [BR:
dhg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EYB58_19585 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PDDEXK_1
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
QBH14924
UniProt:
A0A328F7H0
LinkDB
All DBs
Position
complement(4404832..4408464)
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AA seq
1210 aa
AA seq
DB search
MNKPALPLPLDPFALDLEKISLIEASAGTGKTYTITTLFVQLVAMGYKVESILVVTFTEA
AAAELKLRIRKRLVHCLMVLSGQERDEYAADDLTDFLQKQNDADQIRRLLRLAVTCFDQA
AIMTIHSFCFSVLRENAFESNAHFDIELMADNRIFVDQVVRDFFSGRINHLDPLFLSFLD
QNNITPDTFAKGLVQAASRPEIRVVPEPLAFQKDQFQEICDDYKDTVKSAAKILNGELED
IRSLIQNHAGIDKRSYNKKNLSNWLGACQKKFEKSPGTDLLFDMTEKGDALYKFTRTRLA
EKTKAGHTPPIHIFFDFCEHVLELSRSMAANLIALQYLFLDDYAAALAAMKQGQGACFFD
DLINDLATALDGPSGPALKTAVRKRFHACLIDEFQDTDPGQYKIFSILFTDPGTAFFMIG
DPKQAIYGFRGGDIFTYMTAANACDQSFTLTKNYRSAPAMVRAVNTIFSSKKNPFGFELI
PFLPVGTPETALDRLVCNKMPVPPATFLVVDTQGLPSNKNGVINKSDAQDLILDILAKDM
LSILKNSDICLLDKDAPGDNGGETPVTPGDMAVLVRTNVQAEAVQKALIKRGIPCFLSKT
GSVFDSIQAQELYDILCAVDRPGDMGLIKAALVSSVYQADEAFLRRMNTDDILAGTWQDR
FAGYRRIWEEKGFIPMITALLYQEDAQPCPCAHMDERGLTNVFHLKELLAQAAMNLGKET
PSKIALLIEWFRKQLFEQTRQATADELRLESDARAVAIVTIHKSKGLEYPIVFLPFLWHA
RTVKDTNAPVLFHDPEDNHALVLDLGSEDRERAMQLNRNEVAAEDMRLLYVALTRASVGV
RIFWGNFAGIEGSALGRLLQPGGSGKDLPLFADLEQLCEASDKSIEAIILKPDTLPEGIF
DAQTVQDNDFIPKTMTRKVAPAWRISSYSALAAGHTYDPVQDGQKERQEPDPDIFLTDAA
PAPAVEIVPLSTFPKGPGAGDFFHKVFEEIDFCDPAAIEPSVVSNLERFGFAMPKAVPDI
CDAVRGVLSAPLDTGQGRCFSLDQITPAHRLVEMEFNITLDRFNPPALGKLFETVEKDEK
IAGYSTRISSMQVSGFKGFLKGFIDLVVCHENQWYILDYKSNYLGPCFSDYNPAALTAAM
ISHDYILQYYLYLAALDRYLRLRLKDYNYTDHFGGVFYLFIRGMAGDKNTGIYFHRPGNE
VIKQLRTILS
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacctgccttgccgttgccccttgacccctttgccctggatcttgaaaagatc
agtctgatcgaagccagtgcaggaaccggaaaaacatataccatcactaccctgtttgtc
cagctggtggccatggggtataaggtggaatccatcctggtggtgacatttaccgaggcg
gctgccgcagagttgaaattaagaatccgcaaacgcctggtccactgtctgatggttctt
tccggtcaggaacgtgacgaatacgcggcggacgatcttaccgattttctgcaaaaacaa
aacgatgcggatcaaattcgtcgcctgcttcgtcttgcggtgacctgttttgaccaggcc
gccattatgaccatccactctttttgcttttccgtgctcagggaaaatgcctttgaaagt
aatgcccattttgacatcgaactgatggcagataaccggatttttgttgaccaggtggtc
cgggattttttttcaggccgtatcaatcatcttgatccattgtttttatcttttctggac
cagaacaatattaccccggatacttttgccaaaggccttgtccaggccgcgtcccggccg
gaaatcagggtggtgccggaacctctggcgtttcaaaaggaccaatttcaagaaatctgt
gacgattacaaagatacggtcaaatcagccgcaaaaatcttaaacggggaactggaagac
atccgaagcctgatccagaaccatgccgggatagataaacgaagttataataaaaaaaat
ctgtctaactggctgggggcctgtcaaaagaaatttgaaaaaagccccggcacggatctg
ctgtttgatatgaccgaaaagggcgatgccctgtataaatttacccggacccggctggca
gaaaagacaaaggccggtcataccccgccgatccatattttttttgatttttgtgaacac
gtgcttgaactgtcccgatccatggcggcaaatcttattgcgttacaatatctgtttctt
gatgattatgccgccgccctggcggccatgaagcaggggcagggtgcctgtttttttgat
gatctgatcaatgatcttgcaacggccttggacgggccgagcggtcctgcgttgaaaacg
gctgtgagaaaacggttccatgcctgcctcattgatgagtttcaggacacggacccgggc
cagtataaaattttttccatcctgttcacagatccgggcacggcttttttcatgatcgga
gatcccaaacaggctatctacggtttcaggggcggtgatatttttacctatatgacggca
gccaatgcctgcgaccaaagcttcaccctgacaaaaaattaccgttccgcaccggccatg
gtgcgggctgtgaataccattttttcatcaaaaaaaaatccgttcggattcgaacttatt
ccttttttgcccgtgggaacacctgaaacagctcttgaccggctggtctgcaacaagatg
cctgtcccgccggcaacctttctggttgtggacacacaagggttacccagtaacaaaaac
ggtgtaataaataagtccgatgcccaggatcttatattggacatccttgcaaaggatatg
ctttccattttaaagaattccgatatctgtctgctggataaagacgctccgggcgataac
ggtggggaaacacctgtgacaccgggggatatggccgtgctggtgcgtaccaatgtccag
gccgaggcagtgcaaaaagcccttattaaacgtggtatcccctgctttttatccaaaacc
gggtcggtgttcgattccatccaggcccaggagctttatgacatcctttgtgcagtggat
cgccccggggacatgggcctgatcaaggcggctttggtctcttcggtataccaggctgat
gaggcgtttttaaggcgtatgaataccgacgacatccttgccggtacctggcaggaccgg
tttgcaggctacaggcggatctgggaggaaaaaggctttattcccatgatcaccgccctt
ttgtaccaggaagatgcccagccttgcccttgtgcccatatggatgaacggggcttgacc
aatgtgtttcatttaaaggagcttttggcccaggccgccatgaacctgggtaaagagact
ccgtctaagattgccctgttgattgaatggtttcgaaaacagctgtttgaacagacccgg
caggcaaccgccgatgagctgcgcctggaaagtgatgcccgggccgtggccattgtcacc
atccacaaaagcaaggggcttgaataccccattgtgtttctgccttttttgtggcacgcc
cgcaccgtcaaggataccaatgcacctgttttattccatgatccggaagacaatcatgcc
ctggtgctggatttgggctcggaagacagggaacgggccatgcagctgaatcggaatgaa
gtcgctgctgaagatatgcgtttgctctacgtggccctgacccgggcttcggtcggcgta
aggatcttttggggtaattttgcaggcattgaaggctcggcgctgggacgccttttgcag
cctggtggttcaggcaaagatctgcccctgtttgcagaccttgaacaattgtgtgaagcg
tcagacaaaagcattgaagccattatactgaaacctgatactttgcccgaaggcattttt
gatgctcaaacggttcaggataatgattttatcccaaaaaccatgacccgaaaggttgcc
cccgcttggcggatatcaagttattccgcccttgctgcagggcacacctatgatcccgtg
caggacgggcaaaaggagaggcaggagccagatcccgatatttttttgacagatgctgcc
ccggcccctgccgtggaaattgtacccttgtctacttttcccaaaggcccgggagctggc
gattttttccacaaggtgtttgaagaaattgatttttgcgatcctgccgctattgaaccg
tctgttgtcagtaaccttgaacggtttggatttgccatgccaaaggctgttccggatatc
tgcgatgctgtcaggggtgttttatccgccccccttgatacggggcagggtcgatgtttt
tccctggatcagattacgccggcccaccggctggtggagatggagtttaatattaccctg
gaccggtttaacccgccagcccttggcaagttgtttgaaacggttgaaaaagatgaaaaa
attgccggttatagcaccaggatttcctccatgcaggtatccgggtttaaagggttttta
aaaggatttatcgatcttgtggtctgccatgaaaaccaatggtatatcctggattacaag
tccaattacctgggaccttgtttcagtgattataatcctgcagcgctaacggctgccatg
atcagccatgattatatcctgcaatattatctttaccttgcggccctggacaggtattta
aggttacgcctgaaagattataattatactgaccattttggtggcgtcttttacctgttt
atccgggggatggctggggacaaaaacaccgggatctattttcacaggcccggcaatgaa
gttataaagcagttgagaacaattttatcgtaa
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