Desulfobacter hydrogenophilus: EYB58_22100
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Entry
EYB58_22100 CDS
T10839
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
dhg Desulfobacter hydrogenophilus
Pathway
dhg00550
Peptidoglycan biosynthesis
dhg01100
Metabolic pathways
dhg01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
dhg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EYB58_22100 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EYB58_22100 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dhg01011
]
EYB58_22100 (mrdA)
Enzymes [BR:
dhg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
EYB58_22100 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
dhg01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
EYB58_22100 (mrdA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QBH15355
LinkDB
All DBs
Position
complement(4962239..4964104)
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AA seq
621 aa
AA seq
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MGGINQNSDREWIKHRYIGAGLCLVFIFCVLFLRLVYLQIIRGDEYRRLSMTNCVRLKSI
KSSRGLIYDRNHNLLVDNRPAFDLTIVLEDAKPLKETLERLAELTGDSCEELTATIKKAG
RAAFYKPLVLKRDITRDLLAVIEAHQFDLPGIHIDIEPTRNYIHKKTAAHLIGYLGEINK
QELASGKFPNVRSGDPIGRYGVEKSFEQDLQGKRGGHQVEVDVNGRVIKILKTVEPVSGR
DLVLTMDLSLQQKAENLLGENDGAVVALDPSNGDVLVMASSPSFDQNDFIGGISSKKWQA
LRDDPGRPMNNKAIQAEYPPASTYKTITALAGLEEKVIDRNSTFFCPGFYKFGNRRYHCW
NKYGHGNLNVVDAIAQSCDVFFYQTGEKLGVDALARYAHGSGLGRLTGIRLAHERPGLIP
TSVWKKKRFKEPWQAGETLSISIGQGFNLVTPLQMAVFISAIGNSGTLYRPRLVKSVQDA
KGQMIREIEPEITGGLPASKKNLAIVRQGLLEVVHGNRGTARHIRLPGIQIAGKTGTAQV
FSRKAGEKFNNEKLKRTLQDHAWFVCYAPAQDPKIAIAVIIEHGEHGSSAAAPVAKGLIH
AYLGDPEVPTAVVKDDQAHVE
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
gtgggcggaatcaatcaaaattcagatagagaatggattaaacatcgatatataggggcc
ggtctgtgccttgtttttattttttgcgttctttttttaaggcttgtttatcttcagata
atccgcggggacgagtaccggcgactgtctatgaccaattgtgtccggctcaaaagcata
aaatcctccaggggacttatttatgatcgcaatcacaatcttcttgtggacaaccggccg
gcctttgacttgaccattgttctggaagatgccaagcccttgaaggaaacccttgaacgc
ctggccgaattaaccggcgattcctgtgaagaattgacggcaaccataaaaaaagccggg
agagcagcattttacaaaccacttgtccttaaacgggacataacaagggatctgcttgcg
gtcatagaggcccatcagtttgatctgcccggtattcatattgatattgagcccaccaga
aattatatccataaaaaaaccgctgcccatcttataggctatcttggtgagatcaataag
caagagctggcttccggtaaatttccaaatgtccggtccggggatcccattggtcggtac
ggggttgaaaaaagttttgagcaggatctgcagggcaaacggggtggtcaccaggtcgaa
gtggacgtaaacggccgggtgataaaaatacttaagactgtggaaccggtttccggaagg
gatttggtcctgacgatggatctatcacttcaacagaaggccgaaaatttgcttggggag
aatgacggggccgttgtggcacttgacccctcaaacggagatgtcctggttatggcatca
tcgcctagttttgaccagaatgattttattggtggtatttccagtaagaaatggcaggct
ttaagggatgatccaggcagacccatgaacaacaaggcaattcaggccgaatatcccccg
gcatccacatataagacgattacggccctggctgggctcgaagaaaaggtcattgaccgc
aattcaacttttttctgtccgggattttataagtttggcaaccggcggtaccattgctgg
aataaatacggacatggcaatttaaatgttgtggatgccattgcccagtcctgcgatgtg
tttttttaccagaccggcgaaaaacttggggtcgatgccctggcaaggtatgcgcatggc
tctggtctgggacggttgaccggcattcgtctggcccatgagcgccccggtttgattccc
acttcagtatggaagaaaaagcggttcaaggagccctggcaggccggtgaaaccctatct
atcagtatcggacaggggtttaatttggttacccccttacagatggccgtgttcatttcc
gccattgggaatagtgggactctttatcggccaaggcttgttaaatccgttcaggatgca
aaggggcagatgataagggaaattgaacctgaaattaccggtgggttgccggcttccaaa
aaaaatctggcgattgtgcgacaagggcttttagaagttgttcatggcaaccgcggcact
gcccggcacatccgtcttcccggcattcaaattgcgggaaaaacgggtacggcacaggtt
ttttcccgcaaagccggggaaaagtttaataatgaaaaattgaagcgcaccctccaggat
catgcctggtttgtctgttatgcgcctgcccaggaccctaaaatagccattgccgtgatc
attgaacatggggagcatggttccagcgcggctgcacctgttgcaaaagggctgatccat
gcctatcttggggaccctgaagtcccaactgccgtggtcaaggacgaccaggcacatgtg
gagtaa
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