Dermatobacter hominis: LH044_02375
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Entry
LH044_02375 CDS
T09351
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
dhi
Dermatobacter hominis
Brite
KEGG Orthology (KO) [BR:
dhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
dhi03051
]
LH044_02375 (pafA)
Enzymes [BR:
dhi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
LH044_02375 (pafA)
Proteasome [BR:
dhi03051
]
Prokaryotic proteasome
Bacterial regulatory particles
LH044_02375 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
UDY36390
LinkDB
All DBs
Position
complement(492118..493476)
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AA seq
452 aa
AA seq
DB search
MERRIYGLENEYGVTCTLRGQRRLSPDEVARYLFRRVVSWGRSSNVFLANGARLYLDVGS
HPEYATPECDSLTDLVAHDKAGERILEQLLESAEQRLAEEGIRGDIYLFRNNTDSAGNSY
GCHENYLTSRHDDLTHYTEVLIPFLVSRQIYAGAGKVMQTARGAQFSMAQRAEHIWEGVS
SATTRSRPIINTRDEPHADSDRYRRLHVIVGDSNMSEYATYLKVGATALILRMLEDPTVV
LRDMTLENPIRAIREISHDITCTRRVRLANGREASALEIQSEYLNRALRYAENHDLNTQE
KQALDMWEHVVTGLERDPLSLDREIDWVTKHNLIEAYRERHDIPLSHPRVALLDLQYHDI
SRERSVFYKLQRAGRVERIVTDADIEEAIDTPPQTTRARLRGEFIRKAKERKRDYTVDWV
HLKLNDQAQRTVLCKDPFKAYDERVERLIESL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcaggatctacgggctggagaacgagtacggcgtcacctgcaccctgcgcggg
cagcgacgcctcagcccggacgaggtcgcccggtacctgttccgtcgggtcgtgtcgtgg
ggccggtcctcgaacgtcttcctcgccaacggcgcccggctctacctcgacgtcggctcc
caccccgagtacgccacgcccgagtgcgactcgctcaccgacctcgtcgcccacgacaag
gccggcgagcggatcctcgagcagctgctcgagtcggccgagcagcggctcgccgaggag
ggcatccgcggcgacatctacctgttccgcaacaacaccgactctgcgggcaacagctac
ggctgccacgagaactacctgaccagccgccacgacgacctcacgcactacaccgaggtc
ctcatcccgttcctggtgagccgccagatctacgccggcgccggcaaggtcatgcagacg
gcccggggcgcccagttctcgatggcccagcgggccgagcacatctgggagggcgtcagc
tccgcgaccacgcggtcccggccgatcatcaacacccgcgacgagccgcacgctgattcg
gaccgctaccggcggctccacgtcatcgtcggcgactcgaacatgagcgagtacgccacc
tacctcaaggtcggggccacggcgctcatcctgcggatgctcgaggacccgacggtcgtg
ctgcgggacatgacgctcgagaacccgatccgggccatccgcgagatctcccacgacatc
acctgcacgcgccgggtccgcctggccaacggccgcgaggcctctgcgctcgagatccag
tccgagtacctgaaccgggcgctgcgctacgccgagaaccacgacctgaacacccaggag
aagcaggcgctcgacatgtgggagcacgtcgtcaccggcctggagcgcgatccgctgtcg
ctcgaccgcgagatcgactgggtgacgaagcacaacctgatcgaggcctaccgggagcgc
cacgacatcccgctgtcgcacccgcgggtcgccctgctcgacctgcagtaccacgacatc
agccgcgagcggtcggtgttctacaagctgcagcgggccggtcgggtcgagcggatcgtg
accgacgccgacatcgaggaggcgatcgacacgccgccgcagaccacccgggcccggctg
cggggcgagttcatccgcaaggccaaggagcgcaagcgggactacacggtcgactgggtg
cacctgaagctgaacgaccaggcccagcgcaccgtcctctgcaaggacccgttcaaggcc
tacgacgagcgggtcgagcgcctcatcgagtccctctag
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