Dermatobacter hominis: LH044_04395
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Entry
LH044_04395 CDS
T09351
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dhi
Dermatobacter hominis
Pathway
dhi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dhi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LH044_04395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dhi03019
]
LH044_04395
03400 DNA repair and recombination proteins [BR:
dhi03400
]
LH044_04395
Enzymes [BR:
dhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LH044_04395
Messenger RNA biogenesis [BR:
dhi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LH044_04395
DNA repair and recombination proteins [BR:
dhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LH044_04395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
Pribosyltran
MarR_2
Motif
Other DBs
NCBI-ProteinID:
UDY36781
LinkDB
All DBs
Position
complement(939930..942035)
Genome browser
AA seq
701 aa
AA seq
DB search
MTDAATHPPPVEQPAPRALPPLAAATLAELAGPDAELRPDQAQAIAALALDRSRVLLVQA
TGWGKSAVYWIATRLLREEGAGPTLVVSPLLALMRNQVGAAERAGIRAETINSANLDDWS
EIEARIDADEVDVLLISPERLNNPRFRREVLGPLTARIGLLVVDEAHCISDWGHDFRPDY
RRIADVLASLPPGVPVLAATATANDRVTHDVAEQIGAEAHTFRGSLDRPSLQLGVASFAT
AGERLAWLAGWVRARRGPGIVYCLTVSEVERTASYLASAGISVAAYTGATDPEARAAIED
DLDHGRLACVVATSALGMGYDNAHLGYVVHVGSPSSPVSYYQQVGRAGRGTASAEVVLVP
TPTDGDVWAYFDATAMPPKHTVDEVLGVLERSGPCTVADLEGAVNLRRGRLEVLLKVLDV
EGAVDRDGTQWFRTDQPWEYDQERHHRLAEARRAEQRAMRAYASGSGCRLRFLREALDDP
GAADCGRCDNCTGVRVDATVDADLQASAQQHLRSAVVRIEPRKQWPRGLDDRKGRIAAEL
RPEEGRALAFGTDPGWAEVLGPLFQAPDAEPDDALLRGVAAALKAWDWGRRPTWVTWVPS
RTRPLLVGGLARRLSEVGKLELVEAVRRSRADAPPQERMENSVNQAANVLGAFEFASEVP
PGPGLVVDDSLRSGWTMTVVAEGLRSAGAGLVLPFVLWRRP
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgccgccacccacccgccgcccgtggagcagcccgcgccgcgtgcgctgccg
ccgctcgccgccgccacgctggccgagctcgccggtcccgacgccgagctgcggcccgac
caggcccaggccatcgccgcgctcgccctcgaccggtcgcgggtgctgctcgtgcaggcc
acgggttggggcaagtcagccgtgtactggatcgccacccgactgctccgggaggagggc
gccggccccacgctggtcgtctcgccgctgctcgccctcatgcgcaaccaggtcggcgcc
gccgagcgcgccggcatccgggccgagaccatcaactcggccaacctcgacgactggtcc
gagatcgaggcccggatcgacgccgacgaggtcgacgtgctgctgatctcgcccgaacgg
ctcaacaacccgcggttccggcgcgaggtgctcggcccgctgaccgcccggatcggcctg
ctcgtcgtcgacgaggcgcactgcatctccgactggggccacgacttccggcccgactac
cgccggatcgccgacgtgctggcatcgctcccgcccggtgtgccggtcctcgcggccacc
gccaccgccaacgaccgggtcacccacgacgtcgccgagcagatcggtgccgaggcccac
accttccggggctcgctcgaccgcccgtcgctgcagctcggcgtcgcgtcgttcgcgacg
gcgggggagcggctcgcctggctggccgggtgggtgcgggcccgccgcggtcccggcatc
gtctactgcctgacggtgtccgaggtggagcggaccgcctcgtacctggcgtcggccggg
atctcggtggcggcgtacaccggggccaccgaccccgaggcccgggcggcgatcgaggac
gacctggaccacgggcgactcgcctgcgtcgtcgccacctcggcgctcggaatgggctac
gacaacgcccacctgggctacgtcgtccacgtcggctcgccctcgtcgcccgtctcctac
taccagcaggtcggccgggcgggccggggcacggcgtcggccgaggtcgtgctggtcccc
acaccgaccgacggcgacgtctgggcgtacttcgacgccacggccatgccgcccaagcac
accgtcgacgaggtgctcggcgtcctcgagcgctcggggccctgcaccgtcgccgacctc
gagggggcggtgaacctgcgacgcggtcggctcgaggtcctgctcaaggtcctcgacgtc
gagggcgcggtcgaccgcgacggcacccagtggttccggacggaccagccgtgggagtac
gaccaggagcgccaccaccggctcgccgaggcccgccgcgccgagcagcgggccatgcgg
gcgtacgcgtcgggctcgggctgccgcctgcgcttcctccgggaggcgctcgacgacccc
ggcgccgccgactgcggccggtgcgacaactgcaccggggtgcgggtcgacgccacggtc
gacgccgacctgcaggcctccgcgcagcagcacctccgcagcgcggtggtgcggatcgag
ccccgcaagcagtggccccggggcctcgacgatcgcaagggtcgcatcgccgccgagctg
cggcccgaggagggcagggcgctggcgttcggcaccgaccccggctgggccgaggtcctc
ggtccgctgttccaggcccccgacgccgagcccgacgacgccctgctccgcggcgtcgcc
gcggccctgaaggcgtgggactgggggcgccgaccgacgtgggtgacctgggtcccgagc
cgcacgcggccgctgctcgtcggcggcctcgcccgccggctgtccgaggtcggcaagctc
gagctcgtcgaggccgtgcgccggtcgcgggccgacgcgccgccgcaggagcgcatggag
aactcggtcaaccaggccgcgaacgtgctcggcgccttcgagttcgcctccgaggtgccg
cccggccccgggctggtcgtcgacgactcgctccggtccgggtggacgatgaccgtcgtg
gccgagggcctccgctcggccggtgccgggctggtgctgccgttcgtgctctggcgtcgt
ccctga
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