Dermatobacter hominis: LH044_04930
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Entry
LH044_04930 CDS
T09351
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
dhi
Dermatobacter hominis
Pathway
dhi02024
Quorum sensing
dhi03060
Protein export
dhi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
dhi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LH044_04930 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LH044_04930 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LH044_04930 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
dhi02044
]
LH044_04930 (ffh)
Enzymes [BR:
dhi01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LH044_04930 (ffh)
Secretion system [BR:
dhi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LH044_04930 (ffh)
Eukaryotic Sec-SRP protein
LH044_04930 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
Zeta_toxin
CbiA
cobW
nSTAND3
Thymidylate_kin
AAA_30
AAA_33
APS_kinase
6PF2K
AAA_31
ATP_bind_1
ArsA_ATPase
KTI12
Motif
Other DBs
NCBI-ProteinID:
UDY36877
LinkDB
All DBs
Position
complement(1050515..1051987)
Genome browser
AA seq
490 aa
AA seq
DB search
MFESLSDRFDGIFTRLRGKGRLSEADVDEVLREIRLALLEADVNLTVVRSMLARIRERAV
GEDLSQALNPALQVKKIVLEELTETLGGETLRITYASKPPTIVLMAGLQGSGKTTNSAKL
ARWFKAQGRNPILVGADLQRPAAVQQLRTLGAQIDVPVWSAEDDVVASGQGDPVAVAQGA
VEEARRRGRDVLIVDTAGRLAIDAEMMEQVRQISDSLDPDYTFLVVDAMTGQDAVTVAES
FHQTLELDAVILTKLDGDARGGAALSVKEVVGRPIAFASTGEKLEDFDLFHPDRLAGRIL
GEGDLATLIEKAESAFEQEEAEAAASRLLDGTFTLDDFLDQMQALKKMGPLSGVMSMLPG
VPKEVRDVEIDDRQIAHVEAIIKSMTPAERVEPDVIDGSRRTRIAKGSGTSPTEVTQLIT
QFKQMRQMMKEMGKTPRRRKGKKGGGKKAKKGGRVTAKGPAKVNRAAFALPTLEEMESQL
PKGGGFPKLS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagtcactgtccgaccgcttcgacggcatcttcacccggctccgcggcaagggc
cgcctgtccgaggccgacgtcgacgaggtcctccgggagatccgcctcgccctgctcgag
gcggacgtcaacctcaccgtggtccggtcgatgctggcccgcatccgcgagcgtgcggtc
ggcgaggacctgtcgcaggcgctgaaccccgcgctgcaggtcaagaagatcgtcctcgag
gagctcaccgagaccctcggtggcgagacgctccggatcacctatgcgtcgaagcccccc
acgatcgtgctgatggccggcctgcagggctccggcaagacgaccaactccgccaagctc
gcccgctggttcaaggcgcagggccgcaacccgatcctggtcggcgccgacctccagcga
ccggctgccgtccagcagctgcgcaccctgggcgcccagatcgacgtgccggtgtggtcc
gccgaggacgacgtcgtggcctcgggccagggcgacccggtcgccgtcgcgcagggggcg
gtcgaggaggcccggcgccgcggccgcgacgtgctcatcgtcgacaccgccggccgcctc
gcgatcgacgccgagatgatggagcaggtccggcagatctcggactcgctcgaccccgac
tacacgttcctcgtcgtcgacgcgatgaccggccaggacgccgtcaccgtcgccgagtcg
ttccaccagacgctcgagctcgacgccgtcatcctgaccaagctcgacggcgacgcccgc
ggcggcgccgcgctgtcggtcaaggaggtggtcggccgcccgatcgccttcgcatcgacc
ggcgagaagctcgaggacttcgacctcttccaccccgaccgcctcgccggccggatcctg
ggcgagggcgacctcgcgaccctgatcgagaaggcggagtccgccttcgagcaggaggag
gccgaggccgcggcctccaggctcctcgacggcaccttcacgctcgacgacttcctcgac
cagatgcaggccctcaagaagatgggtccgctctccggcgtcatgtcgatgctgcccggc
gtgcccaaggaggtgcgcgacgtcgagatcgacgaccgccagatcgcccacgtcgaggcg
atcatcaagtcgatgacgcccgccgagcgagtcgagcccgacgtgatcgacggctcccgc
cgcacccgcatcgccaagggttcgggcacctcgccgaccgaggtcacccagctcatcacc
cagttcaagcagatgcgccagatgatgaaggagatgggcaagacccctcggcgccgcaag
ggcaagaagggcggcggcaagaaggcgaagaagggcgggcgcgtgaccgccaaggggccg
gcgaaggtcaacagggccgccttcgccctgccgacgctcgaggagatggagtcccagctg
cccaagggcggcgggttcccgaagctgtcctga
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