Dermatobacter hominis: LH044_04990
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Entry
LH044_04990 CDS
T09351
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dhi
Dermatobacter hominis
Pathway
dhi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LH044_04990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dhi03400
]
LH044_04990
Enzymes [BR:
dhi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LH044_04990
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LH044_04990
DNA repair and recombination proteins [BR:
dhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LH044_04990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
UDY36889
LinkDB
All DBs
Position
complement(1064697..1065530)
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AA seq
277 aa
AA seq
DB search
MPELPELELLRRDLEREVDDKKVKAVEAPGTGFVSTPSKKAFTTALTGAKITSVDRKGTL
LVLGVEDTHLLVLSLGDKARLLKVQAKDPTETGTGLVITFTQGGQLRLVDPKKGSNVELL
PVDGLDEAHPELATLGLDAVDEPISWTTFGEQLLRRDGKLKSVLMDPTFLVGIGPMYSDE
VLFHAGLRYDRQTTSLSAQEIRRLYRAVVETVHEAVKYGGTTLGEDGWVQLSGKPGEYGE
YLTVYKRDGEMSPRARGPIVKARFGSGYTYYCEQTQV
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctgccggagctggagctgctgcgccgcgacctcgagcgcgaggtcgacgac
aagaaggtgaaggcggtggaggcgcccggcacgggcttcgtgtcaacgccgtcgaagaag
gcgttcaccaccgcgctcaccggggccaagatcacgagcgtcgaccgcaagggcacgttg
ctcgtgctgggcgtcgaggacacccacctgctggtgctgtccctcggcgacaaggcgcgg
ctcctcaaggtgcaggcgaaggacccgaccgagaccggcaccgggctcgtgatcaccttc
acccagggcggccagctgcgcctggtcgacccgaagaagggctcgaacgtcgagctgctg
cccgtcgacggcctcgacgaggcgcaccccgagctcgccacgctcgggctcgacgcagtc
gacgagccgatctcgtggaccacgttcggcgagcagctgctgcgccgcgacgggaagctg
aagtcggtgctgatggacccgaccttcctggtgggcatcggcccgatgtactccgacgag
gtgctgttccacgcggggctccgctacgaccgccagaccaccagcctctccgcccaggag
atccggcgcctgtaccgggccgtcgtggagaccgtccacgaggcggtcaagtacggtggc
accacgctcggcgaggacgggtgggtgcagctctcgggcaagccgggggagtacggcgag
tacctgaccgtgtacaagcgggacggggagatgagcccccgggcgcgggggccgatcgtc
aaggcccgcttcggcagcggctacacgtactactgcgaacagacccaggtctga
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