Dermatobacter hominis: LH044_11075
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Entry
LH044_11075 CDS
T09351
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dhi
Dermatobacter hominis
Pathway
dhi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dhi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LH044_11075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dhi03021
]
LH044_11075
03400 DNA repair and recombination proteins [BR:
dhi03400
]
LH044_11075
Enzymes [BR:
dhi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LH044_11075
Transcription machinery [BR:
dhi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LH044_11075
DNA repair and recombination proteins [BR:
dhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LH044_11075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
HTH_13
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
UDY33892
LinkDB
All DBs
Position
complement(2362936..2366916)
Genome browser
AA seq
1326 aa
AA seq
DB search
MLDVNLFDQLRIGLATADAIRMWSNGEVKKPETINYRTLKPEKDGLFCEKIFGPTKDWEC
YCGKYKRVRFRGIICERCGVEVTRSKVRRERMGHIELAAPAVHIWYLRGTRSWLAYLLSG
IEPREELKAKQLEKVIYFAANLVTHVDEERRHNDLTSLEAEMLGERDAIEKDRELELARR
MEELEGELEALEAEGAKESDLASRRKAADKDLAAIRETYDDELELLNRVWDEFKDLYPRQ
IIEDETLWRELQDRYADYFEGGMGAGAIKLLIDRIDLEEEERKLREAIDPEEGRKPLSAQ
RKQKAIKRLKIVAAFNRQDENGSRVNDPRAMILDVVPVIPPDLRPMVQLDGGRFATSDLN
DLYRRVINRNNRLKRLLDLGAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGSRPLKS
LSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPTLQLHQCGLPKLMALELFKPFVMKALV
DKELAQNIKSAKRMVERRRPQVWDVLEDVIKEHPVLLNRAPTLHRLGIQAFEPILVEGKA
IQIHPLVCAAFNADFDGDQMAVHLPLSAEAQAEARVLMLSANNMLSPAHGKPLVTPTQDM
IIGAFYLTSQVDGADGEGRVYKRMDQVERDIESGELSIHATIEYRGSEFPDLLESPANGS
AAVWRKTTAGRLLFNRALPSGFGFVDEPVRKREMTSIVDRLAIEFERAVAADALDAMKSL
CFNYAMRSGLTISIDDVQTPSDKYDILDRHEAEADKVEKQFRRGIITDGERKQKEVEIWT
TATAEVTRAMQQAMQAKQFNPIDMMVGSGARGNMMQVRQIAGMRGLVANPRGDMIPRPIK
SNFREGLSVLEYFIATPGARKGLVDTALRTADSGYLTRRLVDVAQELIINDRDPFAEGGP
IRSITIEDVRPDEAGKRFYLETRLFSRTLAEDITLADGNELPKGTLVGTEEMEALRDDPG
VTSVRVLSPLTDESELGISGAAYGLSLATGRNIEPGEAVGVIAAQSIGEPGTQLTMRTFH
TGGVAASGGDITGGLPRVVELFEARTPRNKAVLARISGVVRIDDEDGKVWNVTVVGDDGT
EDLHAIERERPLRIREGDEVTAGDALVEGPRDPKELLEIKGVRSVQQYLVDEVQRVYRDQ
GVSIHDKHIELIVRQMTRRIAIQEPGESDFLPGERVDQRVFADTNRQLVTEGKKPAEGRP
ELMGITKASLATDSWLSAASFQETTRVLTEAAIESRSDGLLGLKENIIIGKLIPAGTGMN
QYQEIQTFAPEYEPLDYFSSDAADDSASIAQWLANLGGPSDEELAAEGAANVIEFPDPSG
GAAEGS
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacgtcaacctcttcgaccagctccggatcggcctggccaccgcggacgcgatc
cgcatgtggtccaacggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
ccggagaaggacgggctcttctgcgagaagatcttcggtccgacgaaggactgggagtgc
tactgcggcaagtacaagcgcgtccggttccgcggcatcatctgcgagcgctgcggcgtc
gaggtgacgcgctccaaggtgcgccgcgagcggatgggccacatcgagctcgccgccccg
gccgtgcacatctggtacctccgcggcacccgctcgtggctggcgtacctcctgtcgggc
atcgagccccgtgaggagctcaaggccaagcagctcgagaaggtcatctacttcgcggcc
aacctcgtcacgcacgtcgacgaggagcgccgccacaacgacctcaccagcctcgaggcc
gagatgctcggcgagcgcgacgccatcgagaaggaccgcgagctcgagctggcgcgccgg
atggaggagctcgagggcgagctcgaggccctcgaggccgagggcgccaaggagtccgac
ctcgccagccgccgcaaggccgccgacaaggacctcgcggcgatccgcgagacctacgac
gacgagctcgagctgctgaaccgggtctgggacgagttcaaggacctctacccgcgccag
atcatcgaggacgagaccctgtggcgcgagctgcaggaccgctacgcggactacttcgag
ggcggcatgggcgcgggcgccatcaagctgctcatcgaccgcatcgacctcgaggaggag
gagcgcaagctccgggaggcgatcgaccccgaggagggtcgcaagcccctctccgcgcag
cgcaagcagaaggcgatcaagcgcctcaagatcgtcgcggcgttcaaccgccaggacgag
aacggcagccgggtcaacgacccccgcgccatgatcctcgacgtcgtgccggtgatcccg
cccgacctgcgcccgatggtgcagctcgacggcggccgcttcgccacgtccgacctcaac
gacctgtaccgccgggtcatcaaccggaacaaccgcctgaagcgcctcctcgacctcggt
gcccccgagatcatcgtcaacaacgagaagcgcatgctccaggaggccgtcgacgccctg
ttcgacaacggccgccgcggccgtccggtcacgggtccgggcagccgtccgctcaagtcg
ctgtccgacatgctgaagggcaagcagggccggttccgccagaacctgctcggcaagcgc
gtcgactactccggccgttcggtcatcgtggtcggcccgaccctgcagctgcaccagtgc
ggcctgcccaagctcatggcgctggagctgttcaagcccttcgtcatgaaggcgctggtc
gacaaggagctggcccagaacatcaagtcggccaagcgcatggtcgagcgtcgccgcccg
caggtgtgggacgtcctcgaggacgtcatcaaggagcaccccgtgctcctgaaccgtgcc
ccgacgctgcaccgcctcggcatccaggcgttcgagccgatcctcgtcgagggcaaggcc
atccagatccacccgctcgtctgcgcggcgttcaacgccgacttcgacggcgaccagatg
gccgtgcacctgccgctgtcggccgaggcccaggccgaggcccgcgtgctcatgctcagc
gccaacaacatgctgagccccgcgcacggcaagccgctggtcacgcccacccaggacatg
atcatcggtgccttctacctgacgtcccaggtcgacggcgccgacggcgaaggccgcgtc
tacaagcggatggaccaggtcgagcgcgacatcgaatcgggcgagctcagcatccacgcg
accatcgagtaccggggcagcgagttccccgacctgctcgagtcgccggcgaacggctcc
gccgccgtctggaggaagacgacggccggccgcctgctgttcaaccgggcgctgccctcc
ggcttcggcttcgtggacgagcccgtgcgcaagcgggagatgacctcgatcgtcgaccgt
ctcgccatcgagttcgagcgcgcggtcgcggccgacgccctcgacgccatgaagtcgctc
tgcttcaactacgccatgcggtcgggtctgacgatctcgatcgacgacgtccagacgccg
tcggacaagtacgacatcctcgaccgccacgaagccgaggccgacaaggtcgagaagcag
ttccggcgcggcatcatcaccgacggcgagcggaagcagaaggaggtcgagatctggacc
accgcgaccgccgaggtcacccgggcgatgcagcaggccatgcaggccaagcagttcaac
ccgatcgacatgatggtcggctcgggcgcccgagggaacatgatgcaggtccgccagatc
gcgggcatgcgaggcctggtggccaacccccgcggcgacatgatcccccgcccgatcaag
tccaacttccgtgagggcctgtcggtgctggagtacttcatcgccacgccgggtgcccgg
aagggcctggtcgacaccgccctccggaccgcggactcgggctacctgacccgccgtctg
gtggacgtcgcccaggagctgatcatcaacgaccgggatccgttcgccgagggcggcccg
atccgttcgatcaccatcgaggacgttcgccccgacgaggcgggcaagcggttctacctg
gagacgcgcctgttcagccggaccctcgccgaggacatcaccctcgccgacggcaacgag
ctgcccaagggcacgctcgtcggcaccgaggagatggaggcgctgcgcgacgacccgggg
gtcacctcggtgcgcgtgctgtcgccgctcaccgacgagagcgagctcggcatctccggc
gccgcctacggcctgtcgctcgcgaccggccgcaacatcgagcccggcgaggccgtcggc
gtcatcgccgcccagtcgatcggcgagcccggcacgcagctgaccatgcggaccttccac
accggtggtgtggcggcgtccggcggcgacatcaccggtggccttccccgcgtcgtcgag
ctcttcgaggcccgaaccccgcggaacaaggccgtgctggcccgcatctcgggcgtcgtc
cgcatcgacgacgaggacggcaaggtctggaacgtgaccgtggtcggcgacgacggcacc
gaggacctccacgccatcgagcgcgagcggccgctgcggatccgggagggtgacgaggtc
accgccggcgacgcgctggtcgagggtccccgcgacccgaaggagctgctcgagatcaag
ggcgtgcgctccgtgcagcagtacctggtggacgaggtccagcgggtctaccgcgaccag
ggcgtgtcgatccacgacaagcacatcgagctcatcgtgcggcagatgacccgccgcatc
gccatccaggagccgggggagtccgacttcctccccggcgagcgggtggaccagcgggtc
ttcgcggacaccaaccgccagctggtgaccgagggcaagaagcccgccgagggccgcccc
gagctcatgggcatcacgaaggcctcgctggccaccgactcgtggctgtccgccgcctcc
ttccaggagacgacgcgggtgctcaccgaggcggccatcgagtcccgctccgacggcctg
ctcggcctgaaggagaacatcatcatcggcaagctgatccccgccggtaccggcatgaac
cagtaccaggagatccagacgttcgccccggagtacgagccgctggactacttcagctcg
gacgccgccgacgacagcgccagcatcgcccagtggctcgccaacctcggcggtccgtcc
gacgaggagctggccgccgagggtgccgcgaacgtcatcgagttccccgatccgtcgggg
ggcgcggccgagggttcctga
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