Dermatobacter hominis: LH044_15510
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Entry
LH044_15510 CDS
T09351
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
dhi
Dermatobacter hominis
Brite
KEGG Orthology (KO) [BR:
dhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dhi03019
]
LH044_15510 (hrpB)
Enzymes [BR:
dhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LH044_15510 (hrpB)
Messenger RNA biogenesis [BR:
dhi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LH044_15510 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
AAA_22
AAA_30
HA2_N
Motif
Other DBs
NCBI-ProteinID:
UDY34736
LinkDB
All DBs
Position
complement(3286227..3288803)
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AA seq
858 aa
AA seq
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MTEPSPPPLPVLEVLPRLRSALAGPGAAVLVAPPGTGKTTGVPPALLDEPWAADGRIVVV
QPRRLAARSAARRIAAQLPGDGGVGGTVGYSVRGDREVGPATRIELVTEGLLLRRLQRDP
TLASTAAVLLDEFHERSADIDLLLALLLDVRSSLRPDLRLLVMSATLDPGPVAALLGDGD
PAPVVTATAPLHPVRTLHRPGSVRDRLEDRVAAVVREALAAGPEADGVLGDLLVFLPGRG
EIRRTHAAVGGLGPDVVVHELHGSVPAAEQDAALRPDPRGRRRVVLATSVAETSITVEGV
RVVVDAGRRRTVRVDPATALPGLVTVAVSRAGADQRRGRAGRTGPGTCYRLWSADEERHR
PAADRPEVLDGDLSALLLQVRAWGATPEELRFLDPPTGPHLDAARGLLADLGATGPDGRL
TARGRDLADLGFHPRLGAVVLEATSGPLGPAGAAELAALLEVDLPGEPDLVERWRALRRG
DAPREVREAAREWRRRVPDGRDRRRGPARAGRQVDADGAVAGAVVAGYRDRLARRRTGTR
TDDRGRPQSVYQLVGGGEVAIRPADHPLARSSWLAVVALDRGADGTVGTTHLAVAVEDEL
ALDALADRADEEREVTWDPGRREVAATARRRVGAIVLDERRWPDPPADEVRRALAAGVRS
QGPEAVFDRWHRADELLARLALVRAVDGPVSGAGDGAGEAATGPDLDALLDRVASSGTGS
RRQLATVDVASWLSEGLAWDERRALDELAPLHLELPSGRRVRLRYEPHDATGDGPGGGGP
PPGPVLATRLQDLLGTDVHPTVGGGRVPVVLELLSPAGRPVQRTSDLPGFWRGSYAAVRS
ELRGRYPKHAWPERPWEI
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgaaccctccccgccgccgctcccggtcctcgaggtcctgccccggctgcggtcg
gcgctcgccggtcccggcgccgccgtgctcgtcgcgccccccgggacgggcaagacgacg
ggcgtcccgcccgcgctgctcgacgagccgtgggccgccgacggccgcatcgtcgtcgtg
cagccccggcggctcgcggcccgcagcgcggcccgccggatcgccgcccagctccccggt
gacggaggcgtgggaggcaccgtcggctactcggtgcgcggcgatcgggaggtggggccg
gccacccggatcgagctcgtgaccgaggggctgctcctgcgtcgcctgcagcgcgacccg
acgttggcgtcgaccgccgcggtgctcctcgacgagttccacgagcggtcggccgacatc
gacctcctgctggcgctgctcctcgacgtgcggagctccctgcgtcccgacctgcgcctc
ctcgtgatgtcggccacgctcgaccctggccccgtcgccgcgctgctgggggacggcgac
cccgcgccggtcgtgaccgcgacggcgccgctgcaccccgtccgcaccctgcaccgcccc
ggctcggtccgggaccggctcgaggaccgcgtggcggccgtggtgcgcgaggcgctggcg
gcgggacccgaggccgacggcgtgctcggcgacctgctcgtgttcctcccgggtcggggc
gagatccgtcggacccacgccgcggtgggcgggctcggtccggacgtcgtggtgcacgag
ctccacggctccgtgccggctgcggagcaggacgccgcccttcggcccgacccgcgaggt
cgacgccgcgtggtgctcgccacctccgtggcggagacgtcgatcaccgtcgagggcgtg
cgggtggtcgtcgacgccgggcggcgccgcaccgtgcgcgtcgatccggcgacggcgctc
ccggggctggtcaccgtcgccgtgtcgcgggccggcgccgaccagcgtcgcgggcgggcg
ggtcgcaccggtccgggcacgtgctaccggttgtggtcggccgacgaggagcggcaccgg
ccggccgccgaccgtcccgaggtcctcgacggcgacctctcggcgctcctgctgcaggtg
cgggcgtggggcgcgaccccggaggagctgcgcttcctcgacccgccgaccggaccgcac
ctcgatgcggcccgcggcctgctcgccgacctcggcgcgaccggacccgacgggcgcctc
accgcccggggtcgcgacctcgccgacctggggttccacccgcggctgggcgcggtggtg
ctcgaggcgacctccggtccgctcggtccggccggcgccgcggagctcgcggcgctgctc
gaggtcgacctgccgggcgaacccgacctcgtggagcggtggcgggcgctgcggcgcggc
gatgcgccgcgggaggtgcgtgaggcggcgcgcgagtggcggcgccgggtgcccgacggc
cgcgaccgccggcgcggccccgcgcgggccggccggcaggtcgacgccgacggcgccgtc
gccggggccgtcgtggccggctaccgggatcggctggcccgtcgtcggaccggcacccgc
accgacgaccgggggcggccgcagtcggtgtaccagctcgtcggcggcggcgaggtggcc
atccggcccgccgaccacccgctggcccggtcgtcctggctcgccgtcgtcgcgctcgac
cgcggcgccgacggcacggtcggcaccacgcacctggcggtggccgtggaggacgagctc
gccctcgacgccctggccgaccgggcggacgaggagcgcgaggtcacgtgggaccccggg
cgacgcgaggtggccgccaccgcccggcggcgggtcggcgcgatcgtgctcgacgagcgg
cggtggcccgacccgcccgccgacgaggtgcgccgcgccctggcggcgggcgtccgcagc
cagggacccgaggccgtgttcgaccggtggcaccgggccgacgagctgctggcacggttg
gcgctcgtgcgggcggtcgacggtccggtcagcggtgcgggcgacggtgcgggcgaggcg
gcgaccggtcccgacctcgacgccctgctcgaccgggtggcgtcgtccggcaccggttca
cgccggcagctcgcgacggtggacgtggcgagctggctgtcggagggcttggcgtgggac
gagcggcgggcgctcgacgagctggcgccgctccacctcgagctgccgtccggccggcgc
gtgcgcctccgctacgagccgcacgacgccacgggcgacggcccgggtggcggtgggcca
ccgcccggcccggtgctcgccacgcgcctgcaggacctgctcggcaccgacgtgcacccg
acggtcggcggcgggcgcgtgccggtcgtgctggagctgctgtcccccgccggtcggccg
gtgcagcggacgtcggacctcccgggcttctggcggggcagctacgcggcggtgcgctcg
gagctgcggggccggtaccccaagcacgcctggcccgagcgcccctgggagatatag
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